Integrative Orthology Viewer: CRU_001G08520 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G08520 CRU_001G08620 CRU_002G06370 ... | 4 | |
Tree-based ortholog | CRU_001G08620 CRU_001G08520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G08620 CRU_001G08520 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00016G03050 ATR_00024G01340 | 2 | |
Tree-based ortholog | many-to-many | ATR_00024G01340 ATR_00016G03050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00016G03050 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G09290 AL1G09400 AL1G53480 ... | 4 | |
Tree-based ortholog | many-to-1 | AL1G09400 | 1 | ||
Anchor point | N/A | AL1G53480 AL1G09290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G09400 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09590 AT1G09690 AT1G57660 ... | 4 | |
Tree-based ortholog | many-to-many | AT1G09590 AT1G09690 | 2 | ||
Anchor point | N/A | AT1G09590 AT1G57660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G09690 AT1G09590 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G10550 | 1 | |
Tree-based ortholog | many-to-1 | BV0G10550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G10550 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G06060 BR06G06150 BR08G29150 ... | 6 | |
Tree-based ortholog | many-to-many | BR09G51130 BR08G29200 BR08G29150 ... | 7 | ||
Anchor point | N/A | BR06G06060 BR09G15740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR08G29150 BR06G06060 BR09G51130 ... | 4 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00113G00100 | 1 | |
Tree-based ortholog | many-to-many | CP00113G00110 CP00113G00100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00113G00100 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G06960 | 1 | |
Tree-based ortholog | many-to-1 | CR06G06960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR06G06960 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G15780 | 1 | |
Tree-based ortholog | many-to-1 | CL10G15780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G15780 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00018G01870 | 1 | |
Tree-based ortholog | many-to-many | CS09362G00010 CS00018G01870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G01870 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G05360 | 1 | |
Tree-based ortholog | many-to-1 | CM00011G05360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00011G05360 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G20990 EG0002G29780 | 2 | |
Tree-based ortholog | many-to-many | EG0002G29780 EG0001G20990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G29780 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G09890 FV6G27400 | 2 | |
Tree-based ortholog | many-to-many | FV6G27400 FV5G09890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G27400 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G36560 GM19G39240 | 2 | |
Tree-based ortholog | many-to-many | GM19G39240 GM03G36560 GM06G22900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G39240 GM03G36560 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G23180 GR06G14420 GR06G14430 | 3 | |
Tree-based ortholog | many-to-many | GR06G14430 GR06G14420 GR02G23180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR02G23180 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G068130 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G068130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G068130 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G143540 | 1 | |
Tree-based ortholog | many-to-many | MD00G254770 MD10G018070 MD00G510230 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G143540 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06591G00030 ME08542G00180 | 2 | |
Tree-based ortholog | many-to-many | ME08542G00180 ME06591G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08542G00180 ME06591G00030 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G069905 MT7G107420 | 2 | |
Tree-based ortholog | many-to-many | MT1G069905 MT7G107420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT1G069905 MT7G107420 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G04750 OS10G32820 | 2 | |
Tree-based ortholog | many-to-many | OS10G32820 OS03G04750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS10G32820 OS03G04750 | 2 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G01340 | 1 | |
Tree-based ortholog | many-to-1 | OL15G01340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL15G01340 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G03440 PP00091G00550 PP00107G00800 ... | 4 | |
Tree-based ortholog | many-to-many | PP00091G00550 PP00298G00100 PP00107G00800 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00091G00550 PP00107G00800 PP00001G03440 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G07110 PT03G15950 PT06G19540 ... | 4 | |
Tree-based ortholog | many-to-many | PT01G07110 PT03G15950 PT06G19540 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT03G15950 PT01G07110 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G21840 PPE_007G10520 PPE_007G11780 | 3 | |
Tree-based ortholog | many-to-many | PPE_007G10520 PPE_007G11780 PPE_001G21840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_007G11780 PPE_007G10520 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC27574G00100 | 1 | |
Tree-based ortholog | many-to-1 | RC27574G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27574G00100 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G078960 SL10G080590 | 2 | |
Tree-based ortholog | many-to-many | SL10G080590 SL10G078960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G078960 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST10G019910 ST10G022340 | 2 | |
Tree-based ortholog | many-to-many | ST10G022340 ST10G019910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G019910 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G08200 TP1G08280 TP2G05630 ... | 4 | |
Tree-based ortholog | many-to-many | TP1G08280 TP1G08200 TP2G05830 ... | 4 | ||
Anchor point | N/A | TP2G05630 TP1G08200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TP2G05630 TP1G08280 TP1G08200 ... | 4 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G02290 TC0005G17890 | 2 | |
Tree-based ortholog | many-to-many | TC0005G17880 TC0005G02290 TC0005G17890 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0005G17890 TC0005G02290 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G08790 VV08G08860 | 2 | |
Tree-based ortholog | many-to-many | VV08G08790 VV08G08860 VV01G01550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV08G08860 VV08G08790 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G03160 ZM05G10490 ZM09G28300 | 3 | |
Tree-based ortholog | many-to-many | ZM09G28300 ZM01G03160 ZM05G10490 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G10490 ZM01G03160 ZM09G28300 | 3 |