Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_001G06070
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G06070 CRU_004G10830 | 2 |  |
| Anchor point | CRU_004G10830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_001G06070 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Anchor point | 1-to-1 | ATR_00007G00300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G00420 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G06730 AL4G14590 | 2 | |
| Anchor point | 1-to-1 | AL4G14590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G06730 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G07150 AT2G30040 | 2 | |
| Anchor point | 1-to-many | AT2G30040 AT1G07150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G07150 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G04680 | 1 | |
| Anchor point | 1-to-1 | BV7G04680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G04680 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR10G11480 | 1 | |
| Anchor point | 1-to-many | BR10G00950 BR10G11480 BR05G13580 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G17420 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00002G04070 | 1 | |
| Anchor point | 1-to-1 | CP00002G04070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00002G04070 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G10060 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G00640 | 1 | |
| Anchor point | 1-to-1 | CL03G00640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G00640 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00026G01330 | 1 | |
| Anchor point | 1-to-1 | CS00026G01330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G01330 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00044G00650 | 1 | |
| Anchor point | 1-to-1 | CM00044G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00044G00650 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G17720 | 1 | |
| Anchor point | 1-to-1 | EG0002G17720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G17720 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G22920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G22920 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G39350 GM11G27820 GM14G37500 ... | 4 | |
| Anchor point | 1-to-many | GM11G27820 GM02G39350 GM18G06800 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G39350 GM11G27820 GM14G37500 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G14650 GR04G23240 GR09G11160 ... | 4 | |
| Anchor point | 1-to-many | GR13G26960 GR03G14650 GR09G11160 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G14650 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G041990 | 1 | |
| Malus domestica | Orthologous gene family | many-to-many | MD00G389300 MD03G004930 MD11G005660 | 3 | |
| Anchor point | 1-to-many | MD11G005660 MD03G004930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G004930 MD00G389300 MD11G005660 | 3 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05214G00160 ME02585G00020 | 2 | |
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G071560 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G071560 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G18170 | 1 | |
| Anchor point | 1-to-many | OS03G15570 OS06G05520 OS03G18170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G18170 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL13G01090 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00020G01810 PP00281G00260 PP00017G00180 ... | 6 | |
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G27860 PT09G07320 | 2 | |
| Anchor point | 1-to-1 | PT09G07320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G27860 PT09G07320 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G01980 | 1 | |
| Anchor point | 1-to-1 | PPE_006G01980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01980 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30010G00220 | 1 | |
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G103240 | 1 | |
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G040220 | 1 | |
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G05920 TP4G12600 | 2 | |
| Anchor point | 1-to-many | TP1G05920 TP4G12600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G05920 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G34450 | 1 | |
| Anchor point | 1-to-1 | TC0009G34450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G34450 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G10970 | 1 | |
| Zea mays | Orthologous gene family | many-to-many | ZM01G12340 ZM09G23120 | 2 | |
| Anchor point | 1-to-many | ZM01G12340 ZM09G23120 ZM01G10500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G12340 ZM09G23120 | 2 |