Integrative Orthology Viewer: CRU_001G04890 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G04890 | 1 | |
Tree-based ortholog | CRU_001G04890 | 1 | ||
Anchor point | CRU_002G10900 CRU_004G25090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G04890 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00022G00770 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00022G00770 | 1 | ||
Anchor point | many-to-1 | ATR_00066G02660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G00770 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G05370 | 1 | |
Tree-based ortholog | 1-to-1 | AL1G05370 | 1 | ||
Anchor point | many-to-many | AL1G05370 AL4G31080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G05370 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G05850 | 1 | |
Tree-based ortholog | 1-to-1 | AT1G05850 | 1 | ||
Anchor point | many-to-many | AT2G43570 AT1G05850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05850 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G17440 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G17440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G17440 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR08G30770 BR10G01940 | 2 | |
Tree-based ortholog | 1-to-1 | BR10G01940 | 1 | ||
Anchor point | many-to-many | BR08G30770 BR10G01940 BR03G21580 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G01940 | 1 | ||
Carica papaya | Orthologous gene family | 1-to-1 | CP00050G01220 | 1 | |
Tree-based ortholog | 1-to-1 | CP00050G01220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00050G01220 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G16650 | 1 | |
Tree-based ortholog | 1-to-many | CL05G07220 CL07G16650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G07220 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-many | CS00204G00100 CS03710G00010 | 2 | |
Tree-based ortholog | 1-to-many | CS00204G00100 CS03710G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS03710G00010 CS00204G00100 | 2 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00031G01460 | 1 | |
Tree-based ortholog | 1-to-many | CM00006G08110 CM00031G01460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G08110 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G03980 | 1 | |
Tree-based ortholog | 1-to-many | EG0008G32560 EG0008G03980 | 2 | ||
Anchor point | many-to-many | EG0008G02870 EG0008G03980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G03980 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV4G09090 | 1 | |
Tree-based ortholog | 1-to-1 | FV4G09090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G09090 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM08G29090 GM18G51980 | 2 | |
Tree-based ortholog | 1-to-many | GM15G15360 GM09G04330 GM08G29090 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G04330 GM15G15360 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G07890 GR11G00510 GR11G19850 | 3 | |
Tree-based ortholog | 1-to-1 | GR11G00510 | 1 | ||
Anchor point | many-to-1 | GR06G23030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G00510 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ6G019300 | 1 | |
Anchor point | many-to-1 | LJ3G046070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G019300 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G035790 MD00G228960 MD00G435510 ... | 6 | |
Tree-based ortholog | 1-to-many | MD00G074100 MD16G009970 MD00G369350 ... | 10 | ||
Anchor point | many-to-1 | MD04G000960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G029070 MD00G435510 | 2 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME04209G00540 | 1 | |
Tree-based ortholog | 1-to-many | ME01551G04220 ME04209G00540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04209G00540 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT1G105535 MT7G021640 | 2 | |
Tree-based ortholog | 1-to-many | MT2G034680 MT7G021640 MT1G105535 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G021640 MT1G105535 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS08G41100 OS09G32080 | 2 | |
Tree-based ortholog | 1-to-many | OS09G32080 OS08G41100 | 2 | ||
Anchor point | many-to-1 | OS02G39330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G32080 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00133G00180 PP00305G00070 PP00306G00090 | 3 | |
Tree-based ortholog | 1-to-many | PP00133G00180 PP00306G00090 PP00305G00070 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00305G00070 PP00133G00180 PP00306G00090 | 3 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT10G14160 PT14G14660 | 2 | |
Tree-based ortholog | 1-to-1 | PT10G14160 | 1 | ||
Anchor point | many-to-1 | PT14G14660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G14160 | 1 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G17330 | 1 | |
Tree-based ortholog | 1-to-many | PPE_001G11520 PPE_001G17330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G17330 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC30098G00200 | 1 | |
Tree-based ortholog | 1-to-1 | RC29889G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30098G00200 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL09G098540 SL12G098810 | 2 | |
Anchor point | many-to-1 | SL09G098540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G098540 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST09G031080 ST12G030720 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G030720 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G04670 | 1 | |
Tree-based ortholog | 1-to-1 | TP1G04670 | 1 | ||
Anchor point | many-to-many | TP1G04670 TP4G25640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04670 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-many | TC0004G29700 TC0006G00470 | 2 | |
Tree-based ortholog | 1-to-1 | TC0006G00470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G00470 | 1 | ||
Vitis vinifera | Orthologous gene family | 1-to-many | VV05G10800 VV05G11840 | 2 | |
Tree-based ortholog | 1-to-1 | VV05G11840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G11840 | 1 | ||
Zea mays | Orthologous gene family | 1-to-1 | ZM07G18210 | 1 | |
Tree-based ortholog | 1-to-1 | ZM07G18210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G18210 | 1 |