Integrative Orthology Viewer: CRU_001G01940 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G01940 CRU_033G00010 | 2 | |
Tree-based ortholog | CRU_001G01940 CRU_033G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G01940 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00024G03090 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00024G03090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00024G03090 | 1 | ||
Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G23430 | 1 | |
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G02970 | 1 | |
Tree-based ortholog | many-to-1 | AT1G02970 | 1 | ||
Anchor point | N/A | AT1G02970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G02970 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV7G13220 | 1 | |
Tree-based ortholog | many-to-1 | BV7G13220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G13220 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR08G31880 BR09G54190 | 2 | |
Tree-based ortholog | many-to-1 | BR09G54190 | 1 | ||
Anchor point | N/A | BR09G54190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G54190 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00009G01910 | 1 | |
Tree-based ortholog | many-to-1 | CP00009G01910 | 1 | ||
Anchor point | N/A | CP00009G01910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G01910 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G10080 | 1 | |
Tree-based ortholog | many-to-1 | CR07G10080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G10080 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G05750 | 1 | |
Tree-based ortholog | many-to-1 | CL09G05750 | 1 | ||
Anchor point | N/A | CL09G05750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G05750 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G08050 | 1 | |
Tree-based ortholog | many-to-1 | CS00001G08050 | 1 | ||
Anchor point | N/A | CS00001G08050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G08050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00026G03710 | 1 | |
Tree-based ortholog | many-to-many | CM00026G03710 CM00026G03700 | 2 | ||
Anchor point | N/A | CM00026G03700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G03710 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G10160 EG0008G10200 | 2 | |
Tree-based ortholog | many-to-many | EG0008G10160 EG0008G10200 EG0008G10230 ... | 4 | ||
Anchor point | N/A | EG0008G10160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0008G10160 EG0008G10200 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G45850 | 1 | |
Tree-based ortholog | many-to-1 | FV0G45850 | 1 | ||
Anchor point | N/A | FV0G45850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G45850 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G37010 GM13G13020 | 2 | |
Tree-based ortholog | many-to-many | GM03G37010 GM13G13020 | 2 | ||
Anchor point | N/A | GM03G37010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G37010 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G12970 | 1 | |
Tree-based ortholog | many-to-1 | GR07G12970 | 1 | ||
Anchor point | N/A | GR07G12970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G12970 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G004860 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G129650 MD03G024030 | 2 | |
Tree-based ortholog | many-to-many | MD11G027810 MD00G129650 MD03G024030 ... | 5 | ||
Anchor point | N/A | MD11G027810 MD03G024030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G129650 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04457G01060 ME08265G03460 | 2 | |
Tree-based ortholog | many-to-many | ME04457G01060 ME08265G03460 | 2 | ||
Anchor point | N/A | ME08265G03460 ME04457G01060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04457G01060 ME08265G03460 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G108500 | 1 | |
Tree-based ortholog | many-to-1 | MT7G108500 | 1 | ||
Anchor point | N/A | MT7G108500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G108500 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G04240 | 1 | |
Tree-based ortholog | many-to-1 | OS02G04240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G04240 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL10G00700 OL10G02790 | 2 | |
Tree-based ortholog | many-to-1 | OL10G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G02790 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00207G00550 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00207G00550 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G12950 PT14G13240 | 2 | |
Tree-based ortholog | many-to-many | PT00G12950 PT14G13240 | 2 | ||
Anchor point | N/A | PT14G13240 PT00G12950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G12950 PT14G13240 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G26880 | 1 | |
Tree-based ortholog | many-to-1 | PPE_008G26880 | 1 | ||
Anchor point | N/A | PPE_008G26880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G26880 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30129G00030 | 1 | |
Tree-based ortholog | many-to-1 | RC30129G00030 | 1 | ||
Anchor point | N/A | RC30129G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30129G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G074830 | 1 | |
Tree-based ortholog | many-to-1 | SL09G074830 | 1 | ||
Anchor point | N/A | SL09G074830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G074830 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G022280 | 1 | |
Tree-based ortholog | many-to-1 | ST09G022280 | 1 | ||
Anchor point | N/A | ST09G022280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G022280 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G01960 | 1 | |
Tree-based ortholog | many-to-1 | TP1G01960 | 1 | ||
Anchor point | N/A | TP1G01960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G01960 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G29330 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G29330 | 1 | ||
Anchor point | N/A | TC0001G29330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G29330 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV07G03480 | 1 | |
Tree-based ortholog | many-to-1 | VV07G03480 | 1 | ||
Anchor point | N/A | VV07G03520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G03480 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM04G41060 | 1 | |
Tree-based ortholog | many-to-1 | ZM04G41060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G41060 | 1 |