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Integrative Orthology Viewer:
CRU_001G00730
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G00730 CRU_002G00500 CRU_007G32350 | 3 |  |
| Tree-based ortholog | CRU_001G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_001G00730 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00097G00390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00097G00390 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G00630 AL7G35920 | 2 | |
| Tree-based ortholog | 1-to-many | AL7G35920 AL2G00630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G00630 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G01450 AT1G64300 AT5G41730 | 3 | |
| Tree-based ortholog | 1-to-1 | AT1G01450 | 1 | ||
| Anchor point | N/A | AT1G01450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G01450 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G05550 | 1 | |
| Anchor point | N/A | BV1G05550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G05550 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G10900 BR09G11780 BR09G12320 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BR09G54770 | 1 | ||
| Anchor point | N/A | BR09G54770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G54770 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00194G00060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00122G00280 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G03830 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G01890 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G01370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G01890 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00001G04030 | 1 | |
| Anchor point | N/A | CS00001G04030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G04030 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00005G07140 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00006G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G01440 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G14220 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G19390 | 1 | ||
| Anchor point | N/A | EG0004G19390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G19390 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G04590 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G06250 | 1 | ||
| Anchor point | N/A | FV5G04590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G06250 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM11G02121 | 1 | |
| Tree-based ortholog | 1-to-many | GM16G03040 GM07G06431 | 2 | ||
| Anchor point | N/A | GM07G06431 GM16G03040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G03040 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G13550 GR06G20810 | 2 | |
| Tree-based ortholog | 1-to-1 | GR07G10620 | 1 | ||
| Anchor point | N/A | GR07G10620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G10620 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G036320 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G034180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G034180 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G003300 MD14G010050 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G386340 MD01G006330 MD07G012140 | 3 | ||
| Anchor point | N/A | MD01G006330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G006330 MD07G012140 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME00148G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | ME00148G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00148G00010 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G009600 | 1 | |
| Tree-based ortholog | 1-to-1 | MT8G027990 | 1 | ||
| Anchor point | N/A | MT8G027990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G027990 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G43350 OS05G34910 OS05G50830 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G43350 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G02420 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00051G01640 PP00409G00160 | 2 | |
| Tree-based ortholog | 1-to-many | PP00007G00140 PP00158G00660 PP00409G00160 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00169G00480 PP00286G00390 PP00171G00190 ... | 15 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT03G13700 | 1 | |
| Tree-based ortholog | 1-to-many | PT14G09520 PT02G16800 | 2 | ||
| Anchor point | N/A | PT03G13700 PT02G16800 PT14G09520 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G09520 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G12320 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G17720 | 1 | ||
| Anchor point | N/A | PPE_002G17720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G17720 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC28049G00150 RC30190G05060 | 2 | |
| Tree-based ortholog | 1-to-1 | RC28049G00150 | 1 | ||
| Anchor point | N/A | RC30190G05060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28049G00150 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G008240 SL08G081980 | 2 | |
| Tree-based ortholog | 1-to-1 | SL01G095550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G095550 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST08G009580 ST08G028400 | 2 | |
| Tree-based ortholog | 1-to-1 | ST01G033000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G033000 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00870 TP2G00460 TP7G00360 | 3 | |
| Tree-based ortholog | 1-to-1 | TP1G00870 | 1 | ||
| Anchor point | N/A | TP1G00870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G00870 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G34430 | 1 | |
| Anchor point | N/A | TC0001G34430 TC0003G28780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G34430 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G04290 VV15G05980 | 2 | |
| Tree-based ortholog | 1-to-1 | VV15G05980 | 1 | ||
| Anchor point | N/A | VV02G04290 VV15G05980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G05980 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G23940 ZM08G11480 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G23940 | 1 |