Integrative Orthology Viewer: CR12G02240 (Chlamydomonas reinhardtii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Chlamydomonas reinhardtii | Orthologous gene family | CR12G02230 CR12G02240 CR12G05230 | 3 | |
Tree-based ortholog | CR12G02240 CR12G02230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CR12G02240 CR12G05230 CR12G02230 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00011G01550 | 1 | |
Tree-based ortholog | many-to-many | ATR_00011G01550 ATR_00064G00520 ATR_00039G00550 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00011G01550 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G02820 | 1 | |
Tree-based ortholog | many-to-many | AL2G02820 AL4G21590 AL1G49640 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G11790 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G12240 AT1G62660 | 2 | |
Tree-based ortholog | many-to-many | AT1G62660 AT1G12240 AT2G36190 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G13790 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G06090 BV5G16570 | 2 | |
Tree-based ortholog | many-to-many | BV3G06090 BV5G16570 BV7G11860 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV7G03420 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G08660 BR09G10880 BR09G10890 ... | 5 | |
Tree-based ortholog | many-to-many | BR09G13460 BR09G10880 BR09G10890 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR01G34490 BR05G29140 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G11310 CRU_002G02190 CRU_002G02200 | 3 | |
Tree-based ortholog | many-to-many | CRU_002G02200 CRU_002G02190 CRU_001G11310 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G12740 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G03150 CP00029G01210 CP00029G01230 | 3 | |
Tree-based ortholog | many-to-many | CP00003G03150 CP00029G01230 CP00029G01210 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00104G01000 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G04420 | 1 | |
Tree-based ortholog | many-to-many | CL01G04420 CL01G03620 CL10G16870 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G03620 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00005G02200 CS00018G00380 CS00031G00920 ... | 5 | |
Tree-based ortholog | many-to-many | CS00031G00920 CS00271G00080 CS00018G00380 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00031G00920 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00005G05270 | 1 | |
Tree-based ortholog | many-to-many | CM00005G03200 CM00005G05270 CM00011G04180 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G05270 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G22360 EG0001G24600 EG0003G24030 ... | 8 | |
Tree-based ortholog | many-to-many | EG0001G24600 EG0004G16560 EG0001G22360 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG1928G00020 EG0006G26450 EG0006G26440 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G32930 | 1 | |
Tree-based ortholog | many-to-many | FV7G32930 FV5G00370 FV6G31950 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G00370 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G41990 GM05G04290 GM06G47640 ... | 7 | |
Tree-based ortholog | many-to-many | GM12G00780 GM09G36580 GM06G47640 ... | 25 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM05G04290 GM17G14750 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G11400 GR04G20080 GR06G21260 ... | 6 | |
Tree-based ortholog | many-to-many | GR08G21680 GR03G11400 GR08G23670 ... | 14 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G21260 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G034890 | 1 | |
Tree-based ortholog | many-to-many | LJ2G034890 LJ3G037470 LJ5G004870 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G034890 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G245190 MD06G006540 MD07G016780 ... | 4 | |
Tree-based ortholog | many-to-many | MD00G245190 MD07G016780 MD06G006540 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD12G002630 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01127G00540 ME07035G01110 ME11581G00070 | 3 | |
Tree-based ortholog | many-to-many | ME01127G00540 ME07035G01110 ME11581G00070 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME11581G00070 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G008530 MT4G101630 MT8G017410 | 3 | |
Tree-based ortholog | many-to-many | MT3G008530 MT4G101630 MT1G059700 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G017410 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G01590 OS04G45290 | 2 | |
Tree-based ortholog | many-to-many | OS02G01590 OS04G45290 OS04G33740 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G01590 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00018G01520 PP00051G01780 PP00066G00150 ... | 7 | |
Tree-based ortholog | many-to-many | PP00051G01780 PP00037G00680 PP00371G00160 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00371G00160 PP00177G00130 PP00066G00150 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G11260 PT03G12630 PT06G22740 ... | 5 | |
Tree-based ortholog | many-to-many | PT15G12710 PT03G11260 PT03G12630 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G07750 PT06G21060 PT16G07740 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G26630 PPE_005G08240 | 2 | |
Tree-based ortholog | many-to-many | PPE_002G26630 PPE_005G08240 PPE_007G12570 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_010G00910 PPE_003G03480 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28200G00060 RC30147G01670 | 2 | |
Tree-based ortholog | many-to-many | RC30147G01670 RC28200G00060 RC28629G00190 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC28629G00200 RC28629G00190 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G083910 SL08G079080 | 2 | |
Tree-based ortholog | many-to-many | SL03G083910 SL08G079080 SL10G083290 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G079080 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G019790 ST08G024940 | 2 | |
Tree-based ortholog | many-to-many | ST03G019790 ST08G024940 ST10G025820 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G024940 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10850 TP2G01990 | 2 | |
Tree-based ortholog | many-to-many | TP2G01990 TP1G10850 TP4G18410 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G12010 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G15810 TC0003G25380 | 2 | |
Tree-based ortholog | many-to-many | TC0003G15810 TC0003G25380 TC0009G05240 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0006G11160 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV02G00080 VV09G03320 VV16G04060 | 3 | |
Tree-based ortholog | many-to-many | VV16G04060 VV02G00080 VV08G12210 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV09G03320 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G08490 ZM04G41560 ZM05G16960 | 3 | |
Tree-based ortholog | many-to-many | ZM05G16960 ZM04G41560 ZM02G08490 ... | 11 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G16960 | 1 |