Integrative Orthology Viewer: CR09G00540 (Chlamydomonas reinhardtii)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Chlamydomonas reinhardtii | Orthologous gene family | CR09G00540 CR12G06890 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | CR09G00540 | 1 | ||
Tree-based ortholog | CR09G00540 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G00870 ATR_00006G01630 ATR_00028G00780 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G00870 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00001G00870 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G08230 AL5G03640 AL7G15490 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G15490 | 1 | ||
Tree-based ortholog | 1-to-many | AL7G15490 AL8G21400 AL8G21410 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G04030 AT3G07770 AT4G24190 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G56000 | 1 | ||
Tree-based ortholog | 1-to-many | AT5G56010 AT5G56030 AT5G56000 ... | 4 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G02980 BV0G06390 BV0G62140 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G03390 | 1 | ||
Tree-based ortholog | 1-to-many | BV4G02860 BV3G03390 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G14180 BR01G39560 BR02G29980 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G12370 BR03G12090 | 2 | ||
Tree-based ortholog | 1-to-many | BR03G12370 BR03G12330 BR03G12090 ... | 6 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G07020 CRU_005G02920 CRU_006G26500 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CRU_008G15930 CRU_008G15920 CRU_006G26500 | 3 | ||
Tree-based ortholog | 1-to-many | CRU_008G15930 CRU_006G26500 CRU_008G15920 ... | 5 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00012G01110 CP00029G00510 CP00064G01590 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00107G01130 | 1 | ||
Tree-based ortholog | 1-to-many | CP00029G00510 CP00010G00450 CP00107G01130 ... | 4 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G07130 CL02G09650 CL03G16910 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL03G16950 CL03G16930 CL03G16910 | 3 | ||
Tree-based ortholog | 1-to-many | CL03G16910 CL03G16930 CL03G16950 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G05620 CS00009G01380 CS00019G01430 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00097G00240 | 1 | ||
Tree-based ortholog | 1-to-many | CS00097G00240 CS00009G01380 CS00070G00790 | 3 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G01190 CM00006G10590 CM00014G03850 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G10590 | 1 | ||
Tree-based ortholog | 1-to-many | CM34392G00010 CM00254G00020 CM00006G10590 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G08340 EG0001G23160 EG0002G25480 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G31300 | 1 | ||
Tree-based ortholog | 1-to-many | EG0003G20870 EG0010G06270 EG0001G23160 ... | 12 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G03240 FV2G38370 FV3G03830 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G37770 FV7G37750 | 2 | ||
Tree-based ortholog | 1-to-many | FV7G37750 FV3G35210 FV0G41020 ... | 5 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G09310 GM01G33803 GM02G13790 ... | 14 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G29750 GM09G24410 | 2 | ||
Tree-based ortholog | 1-to-many | GM09G24410 GM08G03690 GM02G47210 ... | 8 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G22060 GR02G10300 GR02G12280 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G10300 GR04G03390 GR13G15030 | 3 | ||
Tree-based ortholog | 1-to-many | GR04G13860 GR02G10300 GR03G15560 ... | 7 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G020290 LJ2G048870 LJ2G049590 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G032880 | 1 | ||
Tree-based ortholog | 1-to-many | LJ2G048870 LJ5G032880 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G183000 MD00G290890 MD01G020780 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G020780 | 1 | ||
Tree-based ortholog | 1-to-many | MD00G014550 MD09G000170 MD14G004560 ... | 7 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00341G00580 ME02943G00330 ME02943G00360 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06974G00060 | 1 | ||
Tree-based ortholog | 1-to-many | ME05280G00720 ME06974G00060 ME06089G00730 ... | 5 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G40400 MT1G025430 MT1G099840 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G452990 | 1 | ||
Tree-based ortholog | 1-to-many | MT1G099840 MT6G452990 MT5G096460 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G01740 OS06G50300 OS08G39140 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS09G30412 OS09G30418 OS08G39140 | 3 | ||
Tree-based ortholog | 1-to-many | OS09G30412 OS08G39140 OS09G30418 ... | 4 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL01G00220 OL10G01300 OL16G00070 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01300 | 1 | ||
Tree-based ortholog | 1-to-1 | OL10G01300 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00020G00810 PP00083G00400 PP00118G01110 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00220G00370 PP00291G00390 PP00258G00290 ... | 5 | ||
Tree-based ortholog | 1-to-many | PP00220G00370 PP00258G00290 PP00220G00330 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G28670 PT01G46600 PT03G13190 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G46600 | 1 | ||
Tree-based ortholog | 1-to-many | PT04G07360 PT06G00280 PT01G28670 ... | 6 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G30670 PPE_001G37240 PPE_002G28820 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G04420 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_005G11410 PPE_002G28820 PPE_006G04420 | 3 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27893G00100 RC29597G00100 RC30138G00600 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27893G00100 | 1 | ||
Tree-based ortholog | 1-to-many | RC30190G04340 RC27893G00100 RC30169G03650 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G007890 SL04G081570 SL05G010670 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G065840 | 1 | ||
Tree-based ortholog | 1-to-many | SL03G007890 SL07G065840 SL06G036290 ... | 4 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G012220 ST04G034950 ST05G006510 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G027990 | 1 | ||
Tree-based ortholog | 1-to-many | ST06G012010 ST06G016410 ST10G005730 ... | 7 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G14740 TP3G06700 TP6G14810 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G17850 | 1 | ||
Tree-based ortholog | 1-to-many | TP7G24520 TP1G26840 TP6G14810 ... | 4 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G18560 TC0002G32020 TC0003G18540 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G00740 | 1 | ||
Tree-based ortholog | 1-to-many | TC0007G00740 TC0003G28100 TC0003G18540 | 3 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G02300 VV12G09460 VV18G10790 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G06270 | 1 | ||
Tree-based ortholog | 1-to-many | VV02G03580 VV05G10290 VV09G00690 ... | 6 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G32560 ZM04G31660 ZM04G32000 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G12980 | 1 | ||
Tree-based ortholog | 1-to-many | ZM10G12980 ZM07G17580 ZM04G32000 ... | 5 |