Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP30992G00030
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP30992G00030 | 1 |  |
| Tree-based ortholog | CP30992G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP30992G00030 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00028G01020 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00016G00820 ATR_00028G01020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00028G01020 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL6G36090 AL7G20010 | 2 | |
| Tree-based ortholog | 1-to-many | AL6G36090 AL7G20010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G36090 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT4G04020 AT4G22240 | 2 | |
| Tree-based ortholog | 1-to-many | AT4G04020 AT4G22240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G04020 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV8G12460 | 1 | |
| Tree-based ortholog | 1-to-1 | BV8G12460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12460 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G12470 BR09G24400 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G24400 BR03G26320 BR01G12470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G24400 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_006G30850 CRU_007G18160 | 2 | |
| Tree-based ortholog | 1-to-many | CRU_006G30850 CRU_007G18160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G30850 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-many | CR03G10460 CR14G00810 | 2 | |
| Tree-based ortholog | 1-to-many | CR14G00810 CR14G00860 CR03G10460 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G10460 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G21730 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G21730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G21730 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00007G03340 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00007G03340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03340 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00007G04480 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00007G04480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G04480 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0005G29980 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G29980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G29980 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G01780 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G01780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G01780 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM09G01080 GM15G11910 | 2 | |
| Tree-based ortholog | 1-to-many | GM09G01080 GM15G11910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G01080 GM15G11910 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G18250 | 1 | |
| Tree-based ortholog | 1-to-many | GR09G18250 GR06G08240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G18250 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G021870 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G021870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G021870 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G340260 MD10G027070 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G340260 MD10G027070 MD00G300200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G027070 MD00G340260 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06598G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06598G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06598G00540 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT2G025040 MT2G025050 | 2 | |
| Tree-based ortholog | 1-to-many | MT2G025040 MT1G099880 MT2G025050 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT2G025040 MT2G025050 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS09G04790 | 1 | |
| Tree-based ortholog | 1-to-1 | OS09G04790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G04790 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G03700 | 1 | |
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00024G00750 PP00083G00500 | 2 | |
| Tree-based ortholog | 1-to-many | PP00024G00750 PP00083G00500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00083G00500 PP00024G00750 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT04G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | PT04G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT04G00320 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G01300 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G01300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G01300 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29738G00520 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29738G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29738G00520 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G081170 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G081170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G081170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G024280 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G024280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G024280 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP6G04720 TP7G20360 | 2 | |
| Tree-based ortholog | 1-to-many | TP6G04720 TP7G20360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G04720 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0006G22190 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0006G22190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G22190 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV02G01730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G01730 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G13560 ZM10G17900 | 2 | |
| Tree-based ortholog | 1-to-many | ZM02G13560 ZM10G17900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G17900 ZM02G13560 | 2 |