Integrative Orthology Viewer: CP00284G00020 (Carica papaya)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Carica papaya | Orthologous gene family | CP00003G02730 CP00284G00020 | 2 | |
Tree-based ortholog | CP00050G00850 CP00284G00020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CP00284G00020 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00090G00160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00090G00160 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G15220 AL8G20620 | 2 | |
Tree-based ortholog | many-to-many | AL7G15220 AL8G20620 | 2 | ||
Anchor point | N/A | AL7G15220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G20620 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G26760 AT5G55230 | 2 | |
Tree-based ortholog | many-to-many | AT4G26760 AT5G55230 | 2 | ||
Anchor point | N/A | AT4G26760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G55230 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G14170 | 1 | |
Tree-based ortholog | many-to-1 | BV4G01440 | 1 | ||
Anchor point | N/A | BV4G01440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G01440 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G12710 BR10G08660 | 2 | |
Tree-based ortholog | many-to-many | BR08G17320 BR01G17140 BR10G08660 ... | 5 | ||
Anchor point | N/A | BR01G17140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G12710 BR10G08660 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G13270 CRU_008G15180 | 2 | |
Tree-based ortholog | many-to-many | CRU_007G13270 CRU_008G15180 | 2 | ||
Anchor point | N/A | CRU_007G13270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G15180 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR14G01360 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR14G01360 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G04720 CL01G06590 CL10G04690 ... | 4 | |
Tree-based ortholog | many-to-1 | CL10G04690 | 1 | ||
Anchor point | N/A | CL10G04690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G04690 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00049G00450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00049G00450 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00016G01070 CM00021G05020 | 2 | |
Tree-based ortholog | many-to-1 | CM00021G05020 | 1 | ||
Anchor point | N/A | CM00021G05020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G05020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G00700 | 1 | |
Tree-based ortholog | many-to-1 | EG0006G05560 | 1 | ||
Anchor point | N/A | EG0006G29820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G05560 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G00320 FV7G19480 | 2 | |
Tree-based ortholog | many-to-1 | FV3G26300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G26300 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G42210 GM10G32160 GM13G25880 ... | 4 | |
Tree-based ortholog | many-to-many | GM08G43451 GM18G10090 GM14G02180 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM14G02200 GM02G46450 GM14G02180 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G04650 GR02G09380 GR06G06510 ... | 6 | |
Tree-based ortholog | many-to-many | GR13G15740 GR09G44370 GR02G09380 | 3 | ||
Anchor point | N/A | GR02G09380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G09380 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ3G026620 LJ6G008920 | 2 | |
Tree-based ortholog | many-to-1 | LJ6G008920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G008920 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G412800 MD03G016670 | 2 | |
Tree-based ortholog | many-to-many | MD03G016670 MD00G412800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G016670 MD00G412800 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME05875G01950 | 1 | |
Tree-based ortholog | many-to-many | ME03332G00160 ME06278G00390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03332G00160 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G038840 | 1 | |
Tree-based ortholog | many-to-1 | MT5G093860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G093860 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G20370 OS06G40840 | 2 | |
Tree-based ortholog | many-to-many | OS06G20370 OS02G48830 OS06G40840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G20370 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00011G00480 PP00135G00270 PP00135G00290 ... | 5 | |
Tree-based ortholog | many-to-many | PP00153G00230 PP00011G00480 PP00135G00290 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00135G00290 PP00153G00230 PP00011G00480 ... | 5 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT11G09250 PT01G35650 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G09250 PT01G35650 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G34650 PPE_002G03240 PPE_004G21370 | 3 | |
Tree-based ortholog | many-to-1 | PPE_004G21370 | 1 | ||
Anchor point | N/A | PPE_004G21370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G21370 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29686G00110 RC29780G00820 | 2 | |
Tree-based ortholog | many-to-1 | RC29640G00100 | 1 | ||
Anchor point | N/A | RC29640G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29640G00100 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G096680 SL03G007130 | 2 | |
Tree-based ortholog | many-to-many | SL07G064970 SL12G014490 | 2 | ||
Anchor point | N/A | SL07G064970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G064970 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST07G028880 ST12G013150 | 2 | |
Anchor point | N/A | ST07G028880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G028880 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G17160 TP7G24740 | 2 | |
Tree-based ortholog | many-to-many | TP7G24740 TP6G17160 | 2 | ||
Anchor point | N/A | TP7G24740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G17160 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G30350 TC0010G13760 | 2 | |
Tree-based ortholog | many-to-1 | TC0007G02650 | 1 | ||
Anchor point | N/A | TC0007G02650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G02650 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G04660 VV13G12180 VV16G03340 ... | 4 | |
Tree-based ortholog | many-to-1 | VV19G11130 | 1 | ||
Anchor point | N/A | VV19G11130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G11130 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G18160 ZM09G08640 | 2 | |
Tree-based ortholog | many-to-many | ZM09G08640 ZM06G18160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G18160 ZM09G08640 | 2 |