Integrative Orthology Viewer: CP00157G00610 (Carica papaya)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Carica papaya | Orthologous gene family | CP00013G00900 CP00112G00300 CP00157G00610 ... | 4 | |
Tree-based ortholog | CP00157G00610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CP00157G00610 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00002G02000 ATR_00013G00370 ATR_00029G04010 ... | 4 | |
Tree-based ortholog | 1-to-1 | ATR_00063G00690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00063G00690 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G06820 AL3G02900 AL3G02950 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL4G09880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G09880 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G07230 AT2G26870 AT3G03520 ... | 6 | |
Tree-based ortholog | 1-to-1 | AT2G26870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G26870 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G41380 BV0G63410 BV0G63420 ... | 5 | |
Tree-based ortholog | 1-to-1 | BV4G13850 | 1 | ||
Anchor point | N/A | BV4G13840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05130 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G23260 BR01G36020 BR02G39850 ... | 6 | |
Tree-based ortholog | 1-to-1 | BR04G15270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G15270 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G06150 CRU_003G02540 CRU_003G02550 ... | 6 | |
Tree-based ortholog | 1-to-1 | CRU_004G07250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G07250 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL06G08160 CL06G18460 | 2 | |
Tree-based ortholog | 1-to-1 | CL03G11630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G11630 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00026G01000 CS00120G00260 CS00309G00150 | 3 | |
Tree-based ortholog | 1-to-1 | CS00120G00260 | 1 | ||
Anchor point | N/A | CS00120G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00120G00260 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00024G01510 CM00084G00150 CM00089G00490 | 3 | |
Tree-based ortholog | 1-to-1 | CM00024G01510 | 1 | ||
Anchor point | N/A | CM00024G01510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00024G01510 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G00740 EG0002G17920 EG0004G08360 ... | 9 | |
Tree-based ortholog | 1-to-many | EG0010G06080 EG0010G06090 | 2 | ||
Anchor point | N/A | EG0010G06080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G06090 EG0010G06080 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G09850 FV2G47840 FV3G22270 ... | 4 | |
Tree-based ortholog | 1-to-1 | FV2G47840 | 1 | ||
Anchor point | N/A | FV2G47840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G47840 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G22860 GM04G37360 GM06G17730 ... | 8 | |
Tree-based ortholog | 1-to-1 | GM20G08030 | 1 | ||
Anchor point | N/A | GM20G08030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G08030 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G05820 GR01G13380 GR03G12300 ... | 6 | |
Tree-based ortholog | 1-to-1 | GR01G13380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G13380 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G011630 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G011630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G011630 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G283150 MD00G403650 | 2 | |
Tree-based ortholog | 1-to-many | MD00G055850 MD00G123600 MD00G257650 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G283150 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01701G00160 ME03614G01420 ME06512G02500 ... | 6 | |
Tree-based ortholog | 1-to-1 | ME06916G01310 | 1 | ||
Anchor point | N/A | ME06916G01310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06916G01310 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G040680 MT3G099120 MT3G463760 ... | 5 | |
Tree-based ortholog | 1-to-1 | MT3G040680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G040680 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G01190 OS01G72520 OS03G61130 ... | 5 | |
Tree-based ortholog | 1-to-1 | OS01G72520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G72520 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00045G01250 PP00093G00590 PP00223G00210 ... | 5 | |
Tree-based ortholog | 1-to-many | PP00282G00320 PP00093G00590 PP00045G01250 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00227G00110 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G25050 PT01G27550 PT09G04510 ... | 7 | |
Tree-based ortholog | 1-to-many | PT09G06990 PT01G27550 | 2 | ||
Anchor point | N/A | PT01G27550 PT09G06990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G06990 PT01G27550 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G09970 PPE_002G09980 PPE_004G29310 ... | 5 | |
Tree-based ortholog | 1-to-1 | PPE_004G29310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G29310 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29681G00380 RC30142G00020 RC30147G03900 ... | 4 | |
Tree-based ortholog | 1-to-1 | RC30142G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30142G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G008790 SL03G019670 SL09G020190 | 3 | |
Tree-based ortholog | 1-to-1 | SL01G008790 | 1 | ||
Anchor point | N/A | SL01G008790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G008790 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G009480 ST03G024320 | 2 | |
Tree-based ortholog | 1-to-1 | ST01G009480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G009480 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G05990 TP3G02510 TP3G02520 ... | 5 | |
Tree-based ortholog | 1-to-1 | TP4G08610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G08610 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G13360 TC0005G23110 TC0005G23120 ... | 5 | |
Tree-based ortholog | 1-to-1 | TC0009G24490 | 1 | ||
Anchor point | N/A | TC0009G24490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G24490 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G10900 VV15G03420 | 2 | |
Tree-based ortholog | 1-to-many | VV17G08300 VV06G10900 | 2 | ||
Anchor point | N/A | VV06G10900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G10900 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G59820 ZM03G07730 ZM03G20610 ... | 4 | |
Tree-based ortholog | 1-to-1 | ZM03G20610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G20610 | 1 |