Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00130G00370
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00130G00370 | 1 |  |
| Tree-based ortholog | CP00130G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00130G00370 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00049G00670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00049G00670 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL7G37080 AL5G06230 | 2 | |
| Anchor point | N/A | AL7G37080 AL5G06230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G37080 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT5G40760 AT3G27300 | 2 | |
| Anchor point | N/A | AT3G27300 AT5G40760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G40760 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G12700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G12700 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR02G00890 BR09G02370 BR06G33000 | 3 | |
| Anchor point | N/A | BR09G02370 BR06G33000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G00890 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_007G33420 CRU_005G05170 | 2 | |
| Anchor point | N/A | CRU_005G05170 CRU_007G33420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G33420 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR17G06510 | 1 | |
| Tree-based ortholog | 1-to-1 | CR17G06510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G06510 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL00G01490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G01490 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00656G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00656G00030 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0009G14110 | 1 | |
| Anchor point | N/A | EG0009G14110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G14110 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G38090 | 1 | |
| Anchor point | N/A | FV6G38090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G38090 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM19G22690 GM19G24250 GM16G06850 | 3 | |
| Anchor point | N/A | GM16G06850 GM19G24250 GM19G22690 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G06850 GM19G24250 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR06G03870 GR01G26830 GR12G08970 | 3 | |
| Anchor point | N/A | GR06G03870 GR01G26830 GR12G08970 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR06G03870 GR01G26830 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G040210 LJ3G033240 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G033240 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G255400 MD00G495120 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G255400 MD00G495120 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME06697G00300 ME03245G00100 | 2 | |
| Anchor point | N/A | ME03245G00100 ME06697G00300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03245G00100 ME06697G00300 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT6G022860 MT7G037420 MT7G037440 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G022860 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G38840 | 1 | |
| Anchor point | N/A | OS04G40874 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G38840 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G04550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G04550 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00222G00540 PP00073G00990 PP00192G00140 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00192G00140 PP00222G00540 PP00073G00990 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT01G33740 PT17G07020 | 2 | |
| Anchor point | N/A | PT01G33740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT17G07020 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G27740 | 1 | |
| Anchor point | N/A | PPE_003G27740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G27740 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC27721G00020 | 1 | |
| Tree-based ortholog | 1-to-many | RC30128G03450 RC29929G01140 RC27688G00020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27721G00020 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL02G093830 | 1 | |
| Anchor point | N/A | SL02G093830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G093830 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST02G037020 | 1 | |
| Anchor point | N/A | ST02G037020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G037020 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP7G01140 TP2G16460 | 2 | |
| Anchor point | N/A | TP7G01140 TP2G16460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G01140 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G02710 | 1 | |
| Anchor point | N/A | TC0004G02710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G02710 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G01300 | 1 | |
| Anchor point | N/A | VV14G01300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G01300 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G32930 ZM02G11950 | 2 | |
| Anchor point | N/A | ZM05G32930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G32930 | 1 |