Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00117G00750
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00117G00750 | 1 |  |
| Tree-based ortholog | CP00117G00750 | 1 | ||
| Anchor point | CP00044G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00117G00750 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00002G06140 | 1 | |
| Anchor point | 1-to-1 | ATR_00002G06140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G06140 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL7G29330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G29330 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT4G14750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G14750 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G53890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G53890 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR08G07150 BR01G21080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G07150 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_007G26220 | 1 | |
| Anchor point | 1-to-1 | CRU_007G26220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G26220 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G16760 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G16760 | 1 | ||
| Anchor point | 1-to-many | CL03G15720 CL02G16760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G05400 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS01147G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00011G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G00220 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00003G04920 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00003G04920 | 1 | ||
| Anchor point | 1-to-1 | CM00003G04920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G04920 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0008G35450 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0008G35450 | 1 | ||
| Anchor point | 1-to-1 | EG0008G35450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G35450 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G25150 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G25150 | 1 | ||
| Anchor point | 1-to-1 | FV0G25150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G25150 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G40630 GM19G43300 | 2 | |
| Tree-based ortholog | 1-to-many | GM19G43300 GM03G40630 | 2 | ||
| Anchor point | 1-to-many | GM03G40630 GM19G43300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G43300 GM03G40630 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR13G20140 | 1 | |
| Tree-based ortholog | 1-to-1 | GR13G20140 | 1 | ||
| Anchor point | 1-to-1 | GR13G20140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G20140 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G034640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G034640 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G102920 MD00G107840 MD00G289130 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD00G102920 MD04G018080 MD00G289130 | 3 | ||
| Anchor point | 1-to-1 | MD04G018080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G102920 MD00G307900 MD04G018080 ... | 5 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03802G00860 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03802G00860 | 1 | ||
| Anchor point | 1-to-many | ME01551G01800 ME03802G00860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03802G00860 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G114870 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G114870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G114870 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G43580 OS12G41160 OS03G06570 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G43580 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00372G00060 PP00287G00200 PP00060G00500 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00234G00290 PP00147G00300 PP00244G00090 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G05150 PT13G03890 | 2 | |
| Tree-based ortholog | 1-to-1 | PT05G05150 | 1 | ||
| Anchor point | 1-to-many | PT05G05150 PT10G08260 PT13G03890 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G05150 PT13G03890 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G01950 | 1 | |
| Anchor point | 1-to-1 | PPE_001G01950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G01950 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30128G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30128G00170 | 1 | ||
| Anchor point | 1-to-many | RC29844G00760 RC30128G00170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G00170 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G082560 | 1 | |
| Anchor point | 1-to-1 | SL09G082560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G082560 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G024580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024580 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G12880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G12880 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G28580 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G28580 | 1 | ||
| Anchor point | 1-to-1 | TC0005G28580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G28580 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G03390 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G03390 | 1 | ||
| Anchor point | 1-to-1 | VV14G03390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G03390 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G46890 ZM03G16140 ZM09G28800 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G44190 | 1 |