Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00085G00650
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00085G00650 | 1 |  |
| Tree-based ortholog | CP00085G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00085G00650 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00044G00670 | 1 | |
| Anchor point | N/A | ATR_00044G00670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00044G00670 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL6G06410 | 1 | |
| Anchor point | N/A | AL6G06410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G06410 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT5G06750 | 1 | |
| Anchor point | N/A | AT5G06750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G06750 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV8G12330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G01440 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR10G24900 BR02G04460 | 2 | |
| Anchor point | N/A | BR10G24900 BR02G04460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G04460 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G05510 | 1 | |
| Anchor point | N/A | CRU_006G05510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G05510 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G10110 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G15570 | 1 | |
| Anchor point | N/A | CL10G15570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G15570 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00018G02230 | 1 | |
| Anchor point | N/A | CS00018G02230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G02230 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G05610 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G05610 | 1 | ||
| Anchor point | N/A | CM00011G05610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G05610 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0001G20650 | 1 | |
| Anchor point | N/A | EG0001G20650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G20650 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G47060 | 1 | |
| Anchor point | N/A | FV6G47060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G47060 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM02G29170 GM09G17060 GM19G32980 | 3 | |
| Anchor point | N/A | GM09G17060 GM19G32980 GM02G29170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM09G17060 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR12G10080 | 1 | |
| Anchor point | N/A | GR12G10080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G10080 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G016430 | 1 | |
| Anchor point | N/A | LJ5G016430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G016430 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD14G004890 MD09G010800 | 2 | |
| Anchor point | N/A | MD09G010800 MD14G004890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G004890 MD09G010800 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME03602G00080 ME00823G00140 | 2 | |
| Anchor point | N/A | ME03602G00080 ME00823G00140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03602G00080 ME00823G00140 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT00G32210 | 1 | |
| Anchor point | N/A | MT7G093240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G32210 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G46080 OS04G49490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G46080 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G02630 OL02G02620 | 2 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00207G00420 PP00123G00430 PP00012G00220 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00012G00220 PP00207G00420 PP00019G00420 ... | 5 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT16G04560 PT06G19260 | 2 | |
| Anchor point | N/A | PT06G19260 PT16G04560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G19260 PT16G04560 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_007G09060 | 1 | |
| Anchor point | N/A | PPE_007G09060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G09060 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29613G00060 | 1 | |
| Anchor point | N/A | RC29613G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29613G00060 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G078820 SL10G078810 SL10G078800 | 3 | |
| Anchor point | N/A | SL10G078800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL10G078800 SL10G078810 SL10G078820 | 3 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST10G020070 ST10G020080 ST10G020090 ... | 4 | |
| Tree-based ortholog | 1-to-many | ST10G020070 ST10G020090 ST10G020080 ... | 5 | ||
| Anchor point | N/A | ST10G020070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST10G020090 ST10G020080 ST10G020100 | 3 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G36100 | 1 | |
| Anchor point | N/A | TP6G36100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G36100 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0005G17320 TC0007G03600 | 2 | |
| Anchor point | N/A | TC0005G17320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G17320 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV08G09170 | 1 | |
| Anchor point | N/A | VV08G09170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G09170 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G36840 ZM02G06250 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G36840 | 1 |