Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00085G00110
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00085G00110 | 1 |  |
| Tree-based ortholog | CP00085G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00085G00110 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00068G00970 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00068G00970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00068G00970 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G12380 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G12380 | 1 | ||
| Anchor point | N/A | AL3G12380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G12380 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G11945 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G11945 | 1 | ||
| Anchor point | N/A | AT3G11945 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G11945 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G10300 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G10300 | 1 | ||
| Anchor point | N/A | BV0G10300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G10300 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR03G32750 BR05G30740 | 2 | |
| Tree-based ortholog | 1-to-1 | BR03G32750 | 1 | ||
| Anchor point | N/A | BR03G32750 BR05G30740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G30740 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_003G10780 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G10780 | 1 | ||
| Anchor point | N/A | CRU_003G10780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G10780 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR06G09840 | 1 | |
| Tree-based ortholog | 1-to-1 | CR06G09840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G09840 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G15910 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G15910 | 1 | ||
| Anchor point | N/A | CL10G15910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G15910 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00018G01640 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00018G01640 | 1 | ||
| Anchor point | N/A | CS00018G01640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G01640 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-many | CM00011G05250 CM00011G05260 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00011G05250 | 1 | ||
| Anchor point | N/A | CM00011G05250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G05250 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G21140 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G21140 | 1 | ||
| Anchor point | N/A | EG0001G21120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G21140 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G27930 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G27930 | 1 | ||
| Anchor point | N/A | FV6G27930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G27930 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G26820 GM09G15720 | 2 | |
| Tree-based ortholog | 1-to-many | GM02G26820 GM09G15720 | 2 | ||
| Anchor point | N/A | GM19G39140 GM09G15720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G26820 GM09G15720 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G14580 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G14580 | 1 | ||
| Anchor point | N/A | GR06G14550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G14580 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G067860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G034690 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G406000 MD13G027870 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G281760 MD00G406000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G406000 MD13G027870 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08542G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | ME08542G00340 | 1 | ||
| Anchor point | N/A | ME08542G00310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08542G00340 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G054305 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G054305 | 1 | ||
| Anchor point | N/A | MT1G054715 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G054305 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G38850 | 1 | |
| Tree-based ortholog | 1-to-1 | OS07G38850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38850 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL06G01290 | 1 | |
| Tree-based ortholog | 1-to-1 | OL06G01290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G01290 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00066G00710 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00066G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00066G00710 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT06G19760 | 1 | |
| Tree-based ortholog | 1-to-1 | PT06G19760 | 1 | ||
| Anchor point | N/A | PT06G19760 PT16G06290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G19760 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G10870 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G10870 | 1 | ||
| Anchor point | N/A | PPE_007G10870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G10870 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC27553G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | RC27553G00110 | 1 | ||
| Anchor point | N/A | RC27553G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27553G00110 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G051810 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G051810 | 1 | ||
| Anchor point | N/A | SL03G051810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G051810 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G011940 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G011940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G011940 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G10160 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G10160 | 1 | ||
| Anchor point | N/A | TP3G10160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G10160 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G18280 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G18280 | 1 | ||
| Anchor point | N/A | TC0005G18240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G18280 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G08610 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G08610 | 1 | ||
| Anchor point | N/A | VV08G08640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G08610 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G37490 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G37490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G37490 | 1 |