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Integrative Orthology Viewer:
CP00080G01040
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00026G02250 CP00080G01040 CP37043G00010 | 3 |  |
| Tree-based ortholog | CP00080G01040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00080G01040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G03550 ATR_00015G00190 ATR_00015G00520 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ATR_00003G03550 | 1 | ||
| Anchor point | N/A | ATR_00003G03550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G03550 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G02640 AL3G10640 AL3G14290 | 3 | |
| Tree-based ortholog | 1-to-1 | AL3G14290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G14290 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G62830 AT3G10390 AT3G13682 | 3 | |
| Tree-based ortholog | 1-to-1 | AT3G13682 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G13682 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV2G17420 BV4G16330 BV9G03470 | 3 | |
| Tree-based ortholog | 1-to-1 | BV4G16330 | 1 | ||
| Anchor point | N/A | BV4G16330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G16330 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G34570 BR03G32030 BR09G13300 | 3 | |
| Tree-based ortholog | 1-to-1 | BR01G34570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G34570 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G02040 CRU_003G09160 CRU_003G12610 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_003G12610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G12610 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G01440 | 1 | |
| Tree-based ortholog | 1-to-1 | CR07G01440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G01440 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL08G07580 CL08G07590 CL11G12380 | 3 | |
| Tree-based ortholog | 1-to-1 | CL11G12380 | 1 | ||
| Anchor point | N/A | CL11G12380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G12380 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00002G06350 CS00012G00460 CS00274G00130 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00012G00460 | 1 | ||
| Anchor point | N/A | CS00012G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00012G00460 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00032G01470 CM00040G00580 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00032G01470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00032G01470 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G08700 EG0006G30180 EG0007G22700 | 3 | |
| Tree-based ortholog | 1-to-1 | EG0006G08700 | 1 | ||
| Anchor point | N/A | EG0006G08700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G08700 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G37560 FV3G28000 FV7G23120 | 3 | |
| Tree-based ortholog | 1-to-1 | FV3G28000 | 1 | ||
| Anchor point | N/A | FV3G28000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G28000 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G18610 GM06G38600 GM07G09990 ... | 4 | |
| Tree-based ortholog | 1-to-1 | GM06G38600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G38600 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G18880 GR09G31040 GR10G20600 ... | 4 | |
| Tree-based ortholog | 1-to-1 | GR13G16660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G16660 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G046320 LJ1G030190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G030190 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD03G019170 MD08G000430 MD12G014200 | 3 | |
| Tree-based ortholog | 1-to-1 | MD03G019170 | 1 | ||
| Anchor point | N/A | MD03G019170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G019170 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00224G00130 ME03000G00240 ME04485G00010 | 3 | |
| Tree-based ortholog | 1-to-1 | ME03000G00240 | 1 | ||
| Anchor point | N/A | ME03000G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03000G00240 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G050535 MT3G055090 MT6G084700 ... | 4 | |
| Tree-based ortholog | 1-to-many | MT3G055090 MT8G464450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G055090 MT8G464450 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G51880 OS04G47270 OS08G04780 | 3 | |
| Tree-based ortholog | 1-to-1 | OS08G04780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G04780 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL19G00670 | 1 | |
| Tree-based ortholog | 1-to-many | OL04G00200 OL07G00040 OL07G00030 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL19G00670 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00048G00430 PP00145G00370 | 2 | |
| Tree-based ortholog | 1-to-many | PP00048G00430 PP00145G00370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00145G00370 PP00048G00430 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G01310 PT05G24820 PT08G03520 ... | 5 | |
| Tree-based ortholog | 1-to-1 | PT11G12760 | 1 | ||
| Anchor point | N/A | PT11G12760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT11G12760 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G36490 PPE_002G20170 PPE_004G18060 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_004G18060 | 1 | ||
| Anchor point | N/A | PPE_004G18060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G18060 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29080G00080 RC29745G00110 RC30091G00120 | 3 | |
| Tree-based ortholog | 1-to-1 | RC29080G00080 | 1 | ||
| Anchor point | N/A | RC29080G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29080G00080 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G033080 SL05G055580 SL05G055590 ... | 6 | |
| Tree-based ortholog | 1-to-many | SL07G063450 SL07G063500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G063450 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST05G028770 ST05G028780 ST07G026860 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ST07G026860 | 1 | ||
| Anchor point | N/A | ST07G026860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G026860 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G08660 TP3G11880 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G11880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G11880 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0007G06840 TC0008G05490 TC0010G07950 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0007G06840 | 1 | ||
| Anchor point | N/A | TC0007G06840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G06840 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV03G01560 VV13G02740 VV19G03530 | 3 | |
| Tree-based ortholog | 1-to-1 | VV19G03530 | 1 | ||
| Anchor point | N/A | VV19G03530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G03530 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G07210 ZM05G40900 ZM10G10860 | 3 | |
| Tree-based ortholog | 1-to-1 | ZM10G10860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G10860 | 1 |