Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00042G01110
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00042G01110 | 1 |  |
| Tree-based ortholog | CP00042G01110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00042G01110 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00030G00900 | 1 | |
| Anchor point | N/A | ATR_00030G00900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00030G00900 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL3G20260 AL3G20240 | 2 | |
| Anchor point | N/A | AL3G20240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AL3G20240 AL3G20260 | 2 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT3G18690 | 1 | |
| Anchor point | N/A | AT1G21326 AT3G18690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G18690 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G07710 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G07710 | 1 | ||
| Anchor point | N/A | BV6G07710 BV1G12210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G07710 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G35610 | 1 | |
| Tree-based ortholog | 1-to-many | BR01G30950 BR05G24960 BR03G35610 | 3 | ||
| Anchor point | N/A | BR06G15480 BR07G09950 BR05G24960 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G35610 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_003G17660 | 1 | |
| Anchor point | N/A | CRU_001G19880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G17660 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL02G01500 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G01500 | 1 | ||
| Anchor point | N/A | CL02G01500 CL08G06550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G01500 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00078G00290 | 1 | |
| Anchor point | N/A | CS00002G00620 CS00078G00290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00078G00290 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00059G00720 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00059G00720 | 1 | ||
| Anchor point | N/A | CM00059G00720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00059G00720 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0003G20600 EG0003G20670 EG0009G01750 | 3 | |
| Anchor point | N/A | EG0009G01750 EG0006G22520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G22520 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV1G20850 | 1 | |
| Tree-based ortholog | 1-to-1 | FV1G20850 | 1 | ||
| Anchor point | N/A | FV1G20850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G20850 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM05G32350 GM08G15620 | 2 | |
| Tree-based ortholog | 1-to-many | GM04G39270 GM06G15650 GM05G32350 ... | 4 | ||
| Anchor point | N/A | GM06G12960 GM04G39270 GM04G41820 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G15620 GM05G32350 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G11600 | 1 | |
| Tree-based ortholog | 1-to-many | GR11G11600 GR08G00020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G11600 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G043200 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G043200 | 1 | ||
| Anchor point | N/A | LJ4G043200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G043200 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G362230 MD14G004280 MD03G011730 | 3 | |
| Anchor point | N/A | MD14G004280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G013790 MD00G178480 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06948G00310 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06948G00310 | 1 | ||
| Anchor point | N/A | ME06688G00360 ME06948G00310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06948G00310 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT8G093335 MT8G093390 | 2 | |
| Tree-based ortholog | 1-to-many | MT8G093335 MT8G093390 | 2 | ||
| Anchor point | N/A | MT1G028910 MT8G093335 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G093335 MT8G093390 | 2 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G33600 OS04G34050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G33600 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00023G01010 PP00310G00090 PP00004G00780 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00310G00090 PP00023G01030 PP00057G00400 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT05G05780 PT07G11010 | 2 | |
| Tree-based ortholog | 1-to-many | PT07G11010 PT05G05780 | 2 | ||
| Anchor point | N/A | PT05G05780 PT02G07060 PT07G11010 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G05780 PT07G11010 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_001G56470 PPE_002G08300 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G08300 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30136G00160 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30136G00160 | 1 | ||
| Anchor point | N/A | RC30136G00160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30136G00160 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL11G005720 | 1 | |
| Tree-based ortholog | 1-to-1 | SL11G005720 | 1 | ||
| Anchor point | N/A | SL11G005720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G005720 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST11G005740 | 1 | |
| Tree-based ortholog | 1-to-1 | ST11G005740 | 1 | ||
| Anchor point | N/A | ST11G005740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G005740 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G16760 | 1 | |
| Anchor point | N/A | TP1G18880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G16760 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G12120 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G12120 | 1 | ||
| Anchor point | N/A | TC0001G12120 TC0008G14410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G12120 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV18G00370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G00370 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G30120 ZM02G15700 ZM10G16330 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G15700 ZM10G16330 | 2 |