Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CP00012G01810
(Carica papaya)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Carica papaya | Orthologous gene family | CP00012G01810 | 1 |  |
| Tree-based ortholog | CP00012G01810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CP00012G01810 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00028G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00028G00140 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL3G13570 AL1G50630 | 2 | |
| Anchor point | N/A | AL3G13570 AL1G50630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G13570 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT3G13110 AT1G55920 | 2 | |
| Anchor point | N/A | AT3G13110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G13110 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G02270 | 1 | |
| Anchor point | N/A | BV4G02270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G02270 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR05G29820 BR06G00060 BR08G00150 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G29820 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_003G11930 CRU_001G42350 CRU_001G42160 | 3 | |
| Anchor point | N/A | CRU_003G11930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G11930 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR10G10720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G03960 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL09G21380 | 1 | |
| Anchor point | N/A | CL09G21380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G21380 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS07752G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS07752G00010 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00072G00190 | 1 | |
| Anchor point | N/A | CM00072G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00072G00190 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0006G31540 | 1 | |
| Anchor point | N/A | EG0006G31540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G31540 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G42520 | 1 | |
| Anchor point | N/A | FV2G42520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G42520 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G43940 GM18G08910 GM02G46870 ... | 4 | |
| Anchor point | N/A | GM08G43940 GM02G46870 GM14G01840 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G43940 GM18G08910 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR02G09840 GR13G15420 | 2 | |
| Anchor point | N/A | GR13G15420 GR02G09840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G15420 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G007960 LJ2G048760 | 2 | |
| Anchor point | N/A | LJ6G007960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G048760 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G176560 MD00G176580 MD03G016070 | 3 | |
| Anchor point | N/A | MD03G016070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G176560 MD00G176580 MD03G016070 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME02421G01300 ME03332G00560 | 2 | |
| Anchor point | N/A | ME03332G00560 ME02421G01300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03332G00560 ME02421G01300 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT3G058410 MT5G095470 | 2 | |
| Anchor point | N/A | MT5G095470 MT3G058410 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G058410 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G08660 OS03G10050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G52260 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G04550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G01940 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00065G01390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00212G00520 PP00222G00360 PP00403G00170 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT01G36550 PT01G36400 | 2 | |
| Anchor point | N/A | PT01G36400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G36550 PT01G36400 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G24590 | 1 | |
| Anchor point | N/A | PPE_004G24590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G24590 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29629G00030 | 1 | |
| Anchor point | N/A | RC29629G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29629G00030 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G006040 SL07G065340 | 2 | |
| Anchor point | N/A | SL10G006040 SL07G065340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G065340 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST10G005550 ST07G028540 | 2 | |
| Anchor point | N/A | ST07G028540 ST10G005550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G028540 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP3G11280 TP1G41530 | 2 | |
| Anchor point | N/A | TP1G41530 TP3G11280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G11280 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0007G01600 | 1 | |
| Anchor point | N/A | TC0007G01600 TC0006G22950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G01600 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G05290 | 1 | |
| Anchor point | N/A | VV19G05290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G00200 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM01G07430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G26750 | 1 |