Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CM00076G00090
(Cucumis melo)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Cucumis melo | Orthologous gene family | CM00076G00090 CM00113G00070 | 2 |  |
| Tree-based ortholog | CM00076G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CM00076G00090 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00007G01900 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00007G01900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G01900 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G21280 AL8G24170 | 2 | |
| Tree-based ortholog | 1-to-1 | AL5G21280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G21280 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G58350 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G51630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G51630 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV7G08240 BV7G10090 | 2 | |
| Tree-based ortholog | 1-to-1 | BV7G10090 | 1 | ||
| Anchor point | N/A | BV7G10090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G10090 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G11070 BR09G33270 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G33270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G33270 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_005G16870 CRU_008G18430 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_005G16870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G16870 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00086G00360 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00086G00360 | 1 | ||
| Anchor point | N/A | CP00086G00360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00086G00360 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR14G03650 CR06G13920 CR01G09890 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR01G08700 CR01G08690 | 2 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL02G19280 CL04G06390 | 2 | |
| Tree-based ortholog | 1-to-1 | CL04G06390 | 1 | ||
| Anchor point | N/A | CL04G06390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G06390 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00233G00200 CS01217G00010 CS08961G00010 | 3 | |
| Tree-based ortholog | 1-to-many | CS08961G00010 CS00233G00200 | 2 | ||
| Anchor point | N/A | CS00233G00200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS01217G00010 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G05580 EG0010G15930 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0001G05580 | 1 | ||
| Anchor point | N/A | EG0001G05580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G05580 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G31490 FV6G08930 | 2 | |
| Tree-based ortholog | 1-to-1 | FV6G08930 | 1 | ||
| Anchor point | N/A | FV6G08930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G08930 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G32450 GM02G40200 GM03G04450 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM03G04450 GM01G32450 GM18G44761 ... | 4 | ||
| Anchor point | N/A | GM02G40200 GM09G41270 GM18G44761 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G04450 GM01G32450 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR11G12890 GR13G27210 | 2 | |
| Tree-based ortholog | 1-to-1 | GR11G12890 | 1 | ||
| Anchor point | N/A | GR13G27210 GR11G12890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G12890 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G040390 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G040390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G040390 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G261910 MD04G013910 MD11G004210 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G261910 MD12G019330 MD04G013910 | 3 | ||
| Anchor point | N/A | MD04G013910 MD12G019330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G013910 MD12G019330 MD00G261910 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03438G00020 ME03718G00390 ME05084G00070 | 3 | |
| Tree-based ortholog | 1-to-many | ME05084G00070 ME03718G00390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05084G00070 ME03718G00390 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G028830 MT5G075220 MT6G016260 ... | 5 | |
| Tree-based ortholog | 1-to-many | MT4G028830 MT7G072640 MT7G072860 | 3 | ||
| Anchor point | N/A | MT5G075220 MT7G072640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G075220 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G02300 OS11G02305 OS12G02250 | 3 | |
| Tree-based ortholog | 1-to-many | OS11G02305 OS12G02250 OS11G02300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G02300 OS11G02305 | 2 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL08G00140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G00140 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00237G00010 PP00384G00020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00384G00020 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT13G15510 PT16G13460 PT19G12860 | 3 | |
| Tree-based ortholog | 1-to-1 | PT16G13460 | 1 | ||
| Anchor point | N/A | PT16G13460 PT19G12860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G13460 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_004G07000 PPE_006G03110 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_004G07000 PPE_006G29760 | 2 | ||
| Anchor point | N/A | PPE_006G29760 PPE_006G03110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G29760 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29044G00020 RC29804G00120 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29044G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29044G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G082470 SL09G018170 | 2 | |
| Tree-based ortholog | 1-to-1 | SL09G018170 | 1 | ||
| Anchor point | N/A | SL06G082470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G018170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G033260 ST09G015980 | 2 | |
| Tree-based ortholog | 1-to-1 | ST09G015980 | 1 | ||
| Anchor point | N/A | ST09G015980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G015980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP5G10640 TP6G20010 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G10640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10640 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G15910 TC0009G35530 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0004G15910 | 1 | ||
| Anchor point | N/A | TC0009G35530 TC0004G15910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G15910 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV06G00540 VV08G05980 | 2 | |
| Tree-based ortholog | 1-to-1 | VV08G05980 | 1 | ||
| Anchor point | N/A | VV08G05980 VV06G00540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G00540 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM04G28440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G28440 | 1 |