Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CM00011G05030
(Cucumis melo)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Cucumis melo | Orthologous gene family | CM00011G05030 | 1 |  |
| Tree-based ortholog | CM00011G05030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CM00011G05030 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00004G01680 | 1 | |
| Anchor point | N/A | ATR_00004G01680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G01680 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL6G21610 | 1 | |
| Anchor point | N/A | AL6G21610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G21610 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT5G22000 | 1 | |
| Anchor point | N/A | AT5G22000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G22000 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G04250 | 1 | |
| Anchor point | N/A | BV7G04250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G04250 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR03G09390 BR02G10800 | 2 | |
| Anchor point | N/A | BR03G09390 BR02G10800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G14010 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G19120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G19120 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00222G00240 | 1 | |
| Anchor point | N/A | CP00222G00240 CP00103G00460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00103G00460 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G03650 | 1 | |
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G16090 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G16090 | 1 | ||
| Anchor point | N/A | CL10G16090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G16090 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00018G01340 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00018G01340 | 1 | ||
| Anchor point | N/A | CS00018G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00018G01340 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G15760 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G15760 | 1 | ||
| Anchor point | N/A | EG0011G15760 EG0010G05180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G15760 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G28460 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G28460 | 1 | ||
| Anchor point | N/A | FV6G28460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G28460 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G34840 GM03G36270 GM10G10560 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM09G25370 GM12G08186 GM10G10560 ... | 6 | ||
| Anchor point | N/A | GM19G38930 GM13G38720 GM12G31700 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G10560 GM02G34840 GM19G38930 ... | 4 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR06G14740 | 1 | |
| Anchor point | N/A | GR01G12670 GR09G08160 GR06G14740 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G08160 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G067320 | 1 | |
| Anchor point | N/A | LJ1G067320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G018490 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G023280 MD14G004160 | 2 | |
| Tree-based ortholog | 1-to-many | MD14G004160 MD00G023280 MD12G003910 | 3 | ||
| Anchor point | N/A | MD14G004160 MD12G003910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G004160 MD00G023280 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME02892G01050 ME08542G00600 | 2 | |
| Tree-based ortholog | 1-to-many | ME02892G01050 ME08542G00600 | 2 | ||
| Anchor point | N/A | ME02892G01050 ME08542G00600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08542G00600 ME02892G01050 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G106770 | 1 | |
| Anchor point | N/A | MT7G106770 MT2G087820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G087820 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS11G36430 OS03G57500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G36430 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00159G00180 PP00158G00070 PP00013G00820 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00158G00070 PP00159G00180 PP00013G00820 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G20020 PT16G06640 | 2 | |
| Tree-based ortholog | 1-to-many | PT16G06640 PT06G20020 | 2 | ||
| Anchor point | N/A | PT01G21380 PT06G20020 PT16G06640 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G06640 PT06G20020 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G11250 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G11250 | 1 | ||
| Anchor point | N/A | PPE_006G15130 PPE_007G11250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G11250 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29333G00430 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29333G00430 | 1 | ||
| Anchor point | N/A | RC29333G00430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29333G00430 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G081710 | 1 | |
| Tree-based ortholog | 1-to-many | SL10G081710 SL01G006810 | 2 | ||
| Anchor point | N/A | SL06G073860 SL01G006810 SL10G081710 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G081710 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST10G026400 | 1 | |
| Tree-based ortholog | 1-to-many | ST10G026400 ST01G007370 | 2 | ||
| Anchor point | N/A | ST06G030260 ST01G007370 ST10G026400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G007370 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G23190 | 1 | |
| Anchor point | N/A | TP6G23190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G23190 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G10770 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G10770 | 1 | ||
| Anchor point | N/A | TC0009G26370 TC0005G10770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G10770 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G01260 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G01260 | 1 | ||
| Anchor point | N/A | VV08G01260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G01260 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM04G32520 ZM02G46710 ZM05G02910 | 3 | |
| Anchor point | N/A | ZM05G02910 ZM02G46710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G32520 | 1 |