Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CM00001G00630
(Cucumis melo)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Cucumis melo | Orthologous gene family | CM00001G00630 | 1 |  |
| Tree-based ortholog | CM00001G00630 | 1 | ||
| Anchor point | CM00016G04140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CM00001G00630 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G04180 | 1 | |
| Anchor point | 1-to-1 | ATR_00010G04180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04180 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G19760 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G19760 | 1 | ||
| Anchor point | 1-to-many | AL1G15020 AL5G02480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G02480 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G18810 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G18810 | 1 | ||
| Anchor point | 1-to-many | AT2G02950 AT1G14280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G02950 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G60970 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G60970 | 1 | ||
| Anchor point | 1-to-1 | BV0G60970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G60970 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR08G25880 | 1 | |
| Tree-based ortholog | 1-to-1 | BR08G25880 | 1 | ||
| Anchor point | 1-to-1 | BR06G34760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G09490 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G17670 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G17670 | 1 | ||
| Anchor point | 1-to-many | CRU_001G13330 CRU_005G01680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G01680 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00111G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00111G00020 | 1 | ||
| Anchor point | 1-to-1 | CP00128G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00111G00020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL04G12150 | 1 | |
| Tree-based ortholog | 1-to-1 | CL04G12150 | 1 | ||
| Anchor point | 1-to-many | CL05G25310 CL04G12150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12150 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00003G04230 | 1 | |
| Anchor point | 1-to-many | CS00009G00600 CS00003G04230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G04230 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G04110 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G04110 | 1 | ||
| Anchor point | 1-to-1 | EG0002G04110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G04110 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G13470 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G13470 | 1 | ||
| Anchor point | 1-to-many | FV0G05620 FV5G13470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G13470 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM18G15180 GM08G41200 GM01G05565 ... | 4 | |
| Anchor point | 1-to-1 | GM02G11880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G05565 GM02G11880 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR01G07190 | 1 | |
| Tree-based ortholog | 1-to-many | GR03G09670 GR01G07190 GR08G19250 | 3 | ||
| Anchor point | 1-to-many | GR01G07190 GR03G09670 GR13G08480 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G07190 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G021800 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G045710 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G045710 | 1 | ||
| Anchor point | 1-to-many | MD13G004780 MD16G003910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G225490 MD00G049590 MD00G045710 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME08359G02410 ME12794G02070 | 2 | |
| Tree-based ortholog | 1-to-many | ME12794G02070 ME08359G02410 | 2 | ||
| Anchor point | 1-to-many | ME11495G00330 ME08359G02410 ME12794G02070 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12794G02070 ME08359G02410 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G055860 MT5G040340 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G040340 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT15G06260 | 1 | |
| Tree-based ortholog | 1-to-1 | PT15G06260 | 1 | ||
| Anchor point | 1-to-1 | PT15G06260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G06260 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G19670 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G19670 | 1 | ||
| Anchor point | 1-to-many | PPE_005G19670 PPE_001G28470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G19670 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30147G07920 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30147G07920 | 1 | ||
| Anchor point | 1-to-many | RC30147G07920 RC29813G00280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G07920 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL03G116160 SL06G069880 | 2 | |
| Tree-based ortholog | 1-to-many | SL03G116160 SL06G069880 | 2 | ||
| Anchor point | 1-to-many | SL03G116160 SL06G069880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G069880 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST03G029600 ST06G026870 | 2 | |
| Tree-based ortholog | 1-to-many | ST03G029600 ST06G026870 | 2 | ||
| Anchor point | 1-to-many | ST03G029600 ST06G026870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G026870 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G16790 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G16790 | 1 | ||
| Anchor point | 1-to-many | TP1G16790 TP2G13980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G13980 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G08770 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G08770 | 1 | ||
| Anchor point | 1-to-many | TC0003G08770 TC0002G34550 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G08770 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV17G03830 | 1 | |
| Tree-based ortholog | 1-to-1 | VV17G03830 | 1 | ||
| Anchor point | 1-to-many | VV17G03830 VV01G12170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G03830 | 1 |