Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CL04G07490
(Citrullus lanatus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrullus lanatus | Orthologous gene family | CL04G07490 | 1 |  |
| Tree-based ortholog | CL04G07490 | 1 | ||
| Anchor point | CL10G19540 CL11G00860 CL03G01170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | CL04G07490 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00165G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00165G00210 | 1 | ||
| Anchor point | many-to-1 | ATR_00165G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00165G00210 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G24040 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G24040 | 1 | ||
| Anchor point | many-to-1 | AL5G24040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24040 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G54000 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G54000 | 1 | ||
| Anchor point | many-to-1 | AT3G54000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G54000 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV6G17680 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G17680 | 1 | ||
| Anchor point | many-to-1 | BV2G06150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G06150 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G05010 BR09G35070 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G35070 BR04G05010 | 2 | ||
| Anchor point | many-to-many | BR10G12000 BR09G35070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G35070 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_005G19370 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G19370 | 1 | ||
| Anchor point | many-to-1 | CRU_005G19370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19370 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00056G00530 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00056G00530 | 1 | ||
| Anchor point | many-to-many | CP00056G00530 CP00081G00510 CP00019G02430 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00530 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00083G00300 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00083G00300 | 1 | ||
| Anchor point | many-to-many | CS00083G00300 CS00026G00380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00083G00300 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00002G01420 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00002G01420 | 1 | ||
| Anchor point | many-to-many | CM00002G01420 CM00008G02060 CM00011G01320 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01420 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G22310 EG0011G25440 | 2 | |
| Tree-based ortholog | 1-to-many | EG0002G22310 EG0011G25440 | 2 | ||
| Anchor point | many-to-many | EG0002G18240 EG0002G22310 EG0011G25440 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G22310 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G11880 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G11880 | 1 | ||
| Anchor point | many-to-many | FV7G28490 FV6G11880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G11880 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G16970 GM18G41490 | 2 | |
| Tree-based ortholog | 1-to-many | GM03G27551 GM18G41490 GM07G16970 ... | 5 | ||
| Anchor point | many-to-many | GM18G03580 GM18G41490 GM01G26340 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G16970 GM18G41490 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G17880 GR12G10900 | 2 | |
| Tree-based ortholog | 1-to-many | GR12G10900 GR07G37750 GR06G17880 | 3 | ||
| Anchor point | many-to-many | GR12G07370 GR12G10900 GR07G37750 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G17880 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G004210 LJ3G045530 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G045530 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD04G011120 | 1 | |
| Tree-based ortholog | 1-to-1 | MD04G011120 | 1 | ||
| Anchor point | many-to-1 | MD04G011120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G011120 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03651G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | ME03651G00410 | 1 | ||
| Anchor point | many-to-many | ME06512G03030 ME03150G00760 ME08265G02690 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03651G00410 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT00G30430 | 1 | |
| Tree-based ortholog | 1-to-many | MT4G019840 MT00G30430 | 2 | ||
| Anchor point | many-to-many | MT5G081460 MT3G069670 MT4G019840 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT00G30430 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS05G37930 OS01G63050 | 2 | |
| Anchor point | many-to-1 | OS01G63050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G63050 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G09300 PT16G10500 | 2 | |
| Tree-based ortholog | 1-to-many | PT06G09300 PT16G10500 | 2 | ||
| Anchor point | many-to-many | PT10G19580 PT08G06220 PT16G10500 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G09300 PT16G10500 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G27250 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_004G25780 PPE_006G27250 | 2 | ||
| Anchor point | many-to-many | PPE_006G27250 PPE_002G23380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27250 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28006G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28006G00010 | 1 | ||
| Anchor point | many-to-1 | RC29751G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28006G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL09G011690 | 1 | |
| Tree-based ortholog | 1-to-many | SL10G084970 SL09G011690 | 2 | ||
| Anchor point | many-to-1 | SL10G084970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011690 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST05G014770 | 1 | |
| Tree-based ortholog | 1-to-many | ST10G023850 ST05G014770 ST10G027860 | 3 | ||
| Anchor point | many-to-many | ST06G032290 ST10G027860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014770 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G08400 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G08400 | 1 | ||
| Anchor point | many-to-many | TP5G08400 TP6G20920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08400 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G02680 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G02680 | 1 | ||
| Anchor point | many-to-many | TC0010G02840 TC0009G30650 TC0005G02680 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G02680 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G13660 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G13660 | 1 | ||
| Anchor point | many-to-many | VV06G02620 VV13G04360 VV08G13660 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13660 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM08G14320 ZM06G25510 ZM03G26870 ... | 4 | |
| Anchor point | many-to-many | ZM03G26870 ZM08G14320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G26870 ZM08G31800 | 2 |