Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CL02G24410
(Citrullus lanatus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrullus lanatus | Orthologous gene family | CL02G24410 CL02G24420 | 2 |  |
| Tree-based ortholog | CL02G24410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CL02G24410 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00089G00480 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00071G00380 ATR_00010G00390 ATR_00089G00480 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00089G00480 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G14030 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G12110 | 1 | ||
| Anchor point | N/A | AL3G14030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G14030 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G13490 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G11710 | 1 | ||
| Anchor point | N/A | AT3G13490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G13490 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV3G07720 BV3G07700 BV4G11290 | 3 | |
| Anchor point | N/A | BV4G11290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11290 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR05G29460 | 1 | |
| Tree-based ortholog | 1-to-1 | BR01G37050 | 1 | ||
| Anchor point | N/A | BR05G29460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G29460 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G12390 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_003G10570 | 1 | ||
| Anchor point | N/A | CRU_003G12390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G12390 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00095G00450 CP00119G00370 | 2 | |
| Anchor point | N/A | CP00119G00370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00119G00370 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G04290 CR06G12380 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G12380 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00123G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | CS08021G00010 | 1 | ||
| Anchor point | N/A | CS00123G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00123G00210 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00003G01160 CM00022G05580 | 2 | |
| Anchor point | N/A | CM00022G05580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G05580 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G15270 | 1 | |
| Tree-based ortholog | 1-to-many | EG0003G01100 EG0010G15270 | 2 | ||
| Anchor point | N/A | EG0010G15270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G15270 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G06920 | 1 | |
| Anchor point | N/A | FV3G36010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G36010 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM03G25750 | 1 | |
| Tree-based ortholog | 1-to-many | GM17G03140 GM10G08040 GM13G21870 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G25750 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G02070 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G18320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G02070 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G012940 | 1 | |
| Tree-based ortholog | 1-to-many | LJ4G034700 LJ6G017780 LJ2G012940 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G012940 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD00G350320 | 1 | |
| Anchor point | N/A | MD03G000750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G000230 MD03G000750 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME05161G00060 | 1 | |
| Tree-based ortholog | 1-to-many | ME10097G00190 ME05340G00020 ME05161G00060 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05161G00060 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT8G007295 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G021780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G007295 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G41470 | 1 | |
| Tree-based ortholog | 1-to-many | OS03G38980 OS02G41470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G41470 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G01990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G00970 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00339G00030 PP00108G00600 PP00303G00330 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00303G00330 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT03G22160 | 1 | |
| Tree-based ortholog | 1-to-many | PT18G09060 PT18G09040 PT03G22160 | 3 | ||
| Anchor point | N/A | PT03G22160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G22160 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G01590 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G07720 | 1 | ||
| Anchor point | N/A | PPE_006G01590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G01590 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC28842G00380 | 1 | |
| Tree-based ortholog | 1-to-many | RC29428G00010 RC28842G00380 | 2 | ||
| Anchor point | N/A | RC28842G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28842G00380 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G005540 | 1 | |
| Tree-based ortholog | 1-to-many | SL12G044690 SL07G019620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G005540 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G005760 | 1 | |
| Tree-based ortholog | 1-to-many | ST06G027650 ST01G005760 ST10G027460 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G005760 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G11700 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G09940 | 1 | ||
| Anchor point | N/A | TP3G11700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G11700 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G05720 | 1 | |
| Tree-based ortholog | 1-to-many | TC0004G17200 TC0005G01420 TC0004G05720 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G05720 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV06G07670 | 1 | |
| Tree-based ortholog | 1-to-many | VV00G01370 VV06G07670 | 2 | ||
| Anchor point | N/A | VV06G07670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G07670 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM01G58860 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM01G58860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G58860 | 1 |