Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CL00G00360
(Citrullus lanatus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrullus lanatus | Orthologous gene family | CL00G00360 CL06G16350 CL06G16360 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | CL00G00360 | 1 | ||
| Tree-based ortholog | CL00G00360 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00110G00380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00110G00380 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00110G00380 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G27060 AL3G01110 AL5G09060 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G15310 | 1 | ||
| Tree-based ortholog | 1-to-many | AL3G01110 AL6G15310 AL5G09060 ... | 4 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G26570 AT3G29360 AT5G15490 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G15490 | 1 | ||
| Tree-based ortholog | 1-to-many | AT5G15490 AT3G29360 AT5G39320 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV5G00050 BV7G02050 BV9G04660 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G04660 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV9G04660 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G00450 BR02G07470 BR03G06420 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G19610 | 1 | ||
| Tree-based ortholog | 1-to-many | BR02G07470 BR10G19610 BR03G06420 ... | 6 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G23510 CRU_003G01100 CRU_005G07490 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G07490 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_003G01100 CRU_006G13320 CRU_005G07490 ... | 4 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00094G00190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00094G00190 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00014G01610 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR07G10530 CR06G07440 | 2 | |
| Tree-based ortholog | 1-to-many | CR06G07440 CR07G10530 CR12G10820 | 3 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00003G05180 CS00015G02400 CS00122G00280 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G02400 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00015G02400 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00014G08060 CM00027G00090 CM00030G01380 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G00090 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00027G00090 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G12050 EG0011G20920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G12050 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0010G12050 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G04440 FV5G12500 FV7G21840 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G12500 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G21840 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM14G14161 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G26520 GM18G50000 | 2 | ||
| Tree-based ortholog | 1-to-many | GM19G03500 GM13G06050 GM18G50000 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G07790 GR05G14470 GR07G08180 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G08180 | 1 | ||
| Tree-based ortholog | 1-to-many | GR08G09590 GR07G08180 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ2G017610 LJ2G021020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G017610 | 1 | ||
| Tree-based ortholog | 1-to-1 | LJ2G017610 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G105260 MD00G205080 MD00G211240 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G003140 MD13G004120 MD00G471460 | 3 | ||
| Tree-based ortholog | 1-to-many | MD01G003380 MD00G459090 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03574G00010 ME06609G00370 ME12794G02660 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06609G00370 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME06609G00370 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G082990 MT5G043970 MT7G012950 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G012950 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT7G012950 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G31210 OS03G40720 OS03G55070 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS03G55070 OS12G25700 OS12G25690 | 3 | ||
| Tree-based ortholog | 1-to-many | OS12G25690 OS03G55070 OS12G25700 ... | 6 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01370 OL13G01610 | 2 | |
| Tree-based ortholog | 1-to-many | OL13G01610 OL21G01370 | 2 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00049G01340 PP00134G00550 PP00334G00360 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00334G00360 PP00134G00550 PP00049G01340 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PP00365G00090 PP00134G00550 PP00334G00360 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G11860 PT08G09430 PT10G15980 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G09200 PT04G11860 | 2 | ||
| Tree-based ortholog | 1-to-many | PT17G09200 PT04G11860 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G29580 PPE_003G23690 PPE_005G20670 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G29580 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_007G03640 PPE_003G23690 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC30174G05220 RC30174G05260 RC30174G05270 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30174G05270 RC30174G05260 RC30174G05220 | 3 | ||
| Tree-based ortholog | 1-to-many | RC30174G05260 RC30174G05270 RC30174G05220 | 3 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G067080 SL03G115380 SL06G069550 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067080 | 1 | ||
| Tree-based ortholog | 1-to-many | SL02G088690 SL02G067080 SL03G065350 | 3 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST02G012920 ST03G028860 ST06G026510 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G028860 | 1 | ||
| Tree-based ortholog | 1-to-many | ST02G034190 ST02G012920 ST03G021530 | 3 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G22210 TP2G17950 TP3G01120 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G17950 | 1 | ||
| Tree-based ortholog | 1-to-many | TP3G01120 TP6G28610 TP7G02670 ... | 4 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0002G33270 TC0004G09670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G09670 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0004G09670 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G10260 VV14G02960 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02960 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV14G02960 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G46150 ZM01G53260 ZM05G03990 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G53260 ZM05G03990 | 2 | ||
| Tree-based ortholog | 1-to-many | ZM01G53260 ZM05G03990 ZM01G46150 | 3 |