Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BV9G04910
(Beta vulgaris)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Beta vulgaris | Orthologous gene family | BV8G12370 BV9G04910 | 2 |  |
| Tree-based ortholog | BV9G04910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BV9G04910 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00074G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00074G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00074G00240 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G18130 | 1 | |
| Tree-based ortholog | 1-to-1 | AL4G18130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G18130 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G32950 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G32950 | 1 | ||
| Anchor point | N/A | AT2G32950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G32950 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR05G11260 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G11260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G11260 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G13930 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G13930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G13930 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00970G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP35109G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00152G00600 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G02750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G07250 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G15940 CL02G18290 | 2 | |
| Tree-based ortholog | 1-to-1 | CL02G18290 | 1 | ||
| Anchor point | N/A | CL02G18290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G18290 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00007G03390 CS00126G00300 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00126G00300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00007G03390 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00039G01550 CM00049G00540 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00039G01550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00039G01550 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G06170 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0011G06170 | 1 | ||
| Anchor point | N/A | EG0011G06170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G06170 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G30320 FV3G01890 | 2 | |
| Tree-based ortholog | 1-to-1 | FV0G30320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G30320 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G43540 GM14G05430 | 2 | |
| Tree-based ortholog | 1-to-many | GM14G05430 GM02G43540 | 2 | ||
| Anchor point | N/A | GM02G43540 GM14G05430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G43540 GM14G05430 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR07G17000 GR11G01120 | 2 | |
| Tree-based ortholog | 1-to-1 | GR07G17000 | 1 | ||
| Anchor point | N/A | GR07G17000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G17000 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G043530 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G043530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G043530 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G309190 MD00G434350 MD00G446140 | 3 | |
| Tree-based ortholog | 1-to-many | MD00G309190 MD00G446140 | 2 | ||
| Anchor point | N/A | MD10G027110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G280290 MD10G027110 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME05214G00450 | 1 | |
| Tree-based ortholog | 1-to-1 | ME05214G00450 | 1 | ||
| Anchor point | N/A | ME05214G00450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05214G00450 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G085250 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G085250 | 1 | ||
| Anchor point | N/A | MT5G085250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G085250 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G53140 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G53140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G53140 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G04970 | 1 | |
| Tree-based ortholog | 1-to-1 | OL03G04970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G03410 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00011G01830 PP00025G01590 PP00037G00110 ... | 9 | |
| Tree-based ortholog | 1-to-many | PP00154G00320 PP00180G00760 PP00081G01200 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00264G00180 PP00154G00320 PP00011G01830 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT04G00270 PT11G02170 PT14G15930 | 3 | |
| Tree-based ortholog | 1-to-1 | PT14G15930 | 1 | ||
| Anchor point | N/A | PT14G15930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G15930 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G03500 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G03500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G03500 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC27389G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | RC27389G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27389G00020 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL11G011980 SL12G005950 | 2 | |
| Tree-based ortholog | 1-to-1 | SL12G005950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G005950 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G011790 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G011790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G011790 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G15310 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G15310 | 1 | ||
| Anchor point | N/A | TP4G15310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G15310 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G22250 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G17770 | 1 | ||
| Anchor point | N/A | TC0001G17770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G17770 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV12G11460 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G11460 | 1 | ||
| Anchor point | N/A | VV12G11460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G11460 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G26840 ZM05G41870 | 2 | |
| Tree-based ortholog | 1-to-many | ZM05G41870 ZM04G26840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G26840 ZM05G41870 | 2 |