Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BV3G11520
(Beta vulgaris)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Beta vulgaris | Orthologous gene family | BV3G11520 | 1 |  |
| Tree-based ortholog | BV3G11520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BV3G11520 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00009G03730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00132G00310 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G28790 | 1 | |
| Tree-based ortholog | 1-to-1 | AL4G28790 | 1 | ||
| Anchor point | N/A | AL4G28790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G28790 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G41690 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G41690 | 1 | ||
| Anchor point | N/A | AT2G41690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G41690 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G20830 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G20830 | 1 | ||
| Anchor point | N/A | BR03G20830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G20830 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G23110 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_004G23110 | 1 | ||
| Anchor point | N/A | CRU_004G23110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G23110 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00224G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00224G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00224G00110 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR07G09930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G04630 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-many | CL04G03750 CL10G13820 | 2 | |
| Tree-based ortholog | 1-to-many | CL10G13820 CL04G03750 | 2 | ||
| Anchor point | N/A | CL10G13820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G03750 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00277G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00277G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00277G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00011G07490 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G07490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G07490 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G19570 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G19570 | 1 | ||
| Anchor point | N/A | EG0001G19570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G19570 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G46360 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G46360 | 1 | ||
| Anchor point | N/A | FV6G46360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G46360 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G29190 GM19G31940 | 2 | |
| Tree-based ortholog | 1-to-many | GM19G31940 GM03G29190 | 2 | ||
| Anchor point | N/A | GM19G31940 GM03G29190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G31940 GM03G29190 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR03G09170 | 1 | |
| Tree-based ortholog | 1-to-1 | GR03G09170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G09170 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G058860 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G058860 | 1 | ||
| Anchor point | N/A | LJ1G058860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G058860 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G293070 MD12G006480 | 2 | |
| Tree-based ortholog | 1-to-many | MD12G006480 MD00G293070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G293070 MD12G006480 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME06257G00030 ME07087G00210 | 2 | |
| Tree-based ortholog | 1-to-1 | ME07087G00210 | 1 | ||
| Anchor point | N/A | ME07087G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07087G00210 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT7G091370 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G091370 | 1 | ||
| Anchor point | N/A | MT7G091370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G091370 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G25120 OS07G44690 OS08G36700 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G48030 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL19G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL19G00010 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00085G00130 PP00012G00150 PP00019G00750 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00019G00750 PP00207G00120 PP00012G00150 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT06G04920 PT16G05650 | 2 | |
| Tree-based ortholog | 1-to-1 | PT16G05650 | 1 | ||
| Anchor point | N/A | PT06G04920 PT16G05650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G04920 PT16G05650 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_007G07120 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_007G07120 | 1 | ||
| Anchor point | N/A | PPE_007G07120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G07120 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30006G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30006G00130 | 1 | ||
| Anchor point | N/A | RC30006G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30006G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL04G016000 | 1 | |
| Tree-based ortholog | 1-to-many | SL10G079380 SL04G016000 | 2 | ||
| Anchor point | N/A | SL10G079380 SL04G016000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G016000 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST04G012470 | 1 | |
| Tree-based ortholog | 1-to-many | ST10G021080 ST04G012470 | 2 | ||
| Anchor point | N/A | ST10G021080 ST04G012470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G012470 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G23930 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G23930 | 1 | ||
| Anchor point | N/A | TP4G23930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G23930 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G15070 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G15070 | 1 | ||
| Anchor point | N/A | TC0005G15070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G15070 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV08G07250 | 1 | |
| Tree-based ortholog | 1-to-1 | VV10G00050 | 1 | ||
| Anchor point | N/A | VV08G07250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G07250 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G16300 ZM02G31280 ZM07G28610 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G22150 | 1 |