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Integrative Orthology Viewer:
BR10G29020
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR01G39160 BR05G07200 BR05G32980 ... | 4 |  |
| Tree-based ortholog | BR10G29020 | 1 | ||
| Anchor point | BR04G22810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR10G29020 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03880 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00008G02170 ATR_00009G04100 ATR_00029G03880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03880 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G09130 AL4G24360 AL6G00870 | 3 | |
| Tree-based ortholog | 1-to-1 | AL6G00870 | 1 | ||
| Anchor point | 1-to-many | AL6G00870 AL3G09130 AL4G24360 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G00870 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G38152 AT3G09020 AT5G01250 | 3 | |
| Tree-based ortholog | 1-to-1 | AT5G01250 | 1 | ||
| Anchor point | 1-to-many | AT3G09020 AT2G38150 AT5G01250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G01250 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV9G18330 BV9G18340 | 2 | |
| Tree-based ortholog | 1-to-many | BV9G18330 BV9G18340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV9G18330 BV9G18340 | 2 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_003G07780 CRU_004G19520 CRU_006G00590 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_006G00590 | 1 | ||
| Anchor point | 1-to-many | CRU_003G07780 CRU_006G00590 CRU_004G19510 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G00590 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00163G00120 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00163G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00163G00120 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR16G03850 CR16G03840 | 2 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G19880 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G19880 | 1 | ||
| Anchor point | 1-to-1 | CL10G19880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G19880 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00145G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00145G00240 | 1 | ||
| Anchor point | 1-to-1 | CS00145G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CS00145G00230 CS00145G00210 | 2 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00011G00970 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00011G00970 | 1 | ||
| Anchor point | 1-to-1 | CM00011G00970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G00970 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G03910 EG0011G25150 | 2 | |
| Tree-based ortholog | 1-to-many | EG0001G03910 EG0011G25150 | 2 | ||
| Anchor point | 1-to-1 | EG0011G25150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G03910 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV6G10750 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G10750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G10750 | 1 | ||
| Glycine max | Orthologous gene family | many-to-1 | GM07G17880 | 1 | |
| Tree-based ortholog | 1-to-many | GM01G28511 GM03G09050 GM07G17880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G17880 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G18160 GR12G11300 GR12G11310 | 3 | |
| Tree-based ortholog | 1-to-many | GR12G11300 GR12G11310 GR06G18160 | 3 | ||
| Anchor point | 1-to-many | GR06G18160 GR12G11300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G18160 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ6G027230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G027230 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G486690 MD04G012110 MD12G017280 | 3 | |
| Tree-based ortholog | 1-to-many | MD12G017280 MD00G486690 MD04G012110 | 3 | ||
| Anchor point | 1-to-1 | MD12G017260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G017280 MD00G486690 MD04G012110 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03349G00040 ME03597G00070 | 2 | |
| Tree-based ortholog | 1-to-many | ME03349G00040 ME03597G00070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03597G00070 ME03349G00040 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G067510 | 1 | |
| Tree-based ortholog | 1-to-1 | MT7G067510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G067510 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G44740 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G44740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G44740 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00061G01360 PP00213G00710 | 2 | |
| Tree-based ortholog | 1-to-many | PP00213G00710 PP00061G01360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00061G01360 PP00213G00710 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT16G11420 | 1 | |
| Tree-based ortholog | 1-to-many | PT16G11420 PT06G09890 | 2 | ||
| Anchor point | 1-to-many | PT16G11420 PT06G09840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G11420 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G28190 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G28190 | 1 | ||
| Anchor point | 1-to-1 | PPE_006G28160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G28190 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29969G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29969G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29969G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G014390 SL10G076780 | 2 | |
| Tree-based ortholog | 1-to-many | SL09G014390 SL10G076780 | 2 | ||
| Anchor point | 1-to-1 | SL09G014390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G076780 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST09G005270 ST10G027590 | 2 | |
| Tree-based ortholog | 1-to-many | ST09G005270 ST10G027590 | 2 | ||
| Anchor point | 1-to-1 | ST10G027590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G027590 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G07440 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G07440 | 1 | ||
| Anchor point | 1-to-many | TP4G20470 TP3G07440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G07440 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G01870 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0005G01870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G01870 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV08G13080 | 1 | |
| Tree-based ortholog | 1-to-1 | VV08G13080 | 1 | ||
| Anchor point | 1-to-1 | VV08G13080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13080 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM10G20780 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM10G20780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G20780 | 1 |