Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR10G24050
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR10G24050 | 1 |  |
| Tree-based ortholog | BR10G24050 | 1 | ||
| Anchor point | BR09G36530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR10G24050 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00165G00010 | 1 | |
| Anchor point | 1-to-1 | ATR_00165G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G05200 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL6G05440 | 1 | |
| Tree-based ortholog | 1-to-1 | AL6G05440 | 1 | ||
| Anchor point | 1-to-1 | AL6G05440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05440 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G05840 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G05840 | 1 | ||
| Anchor point | 1-to-many | AT3G55720 AT5G05840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05840 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G05130 | 1 | |
| Anchor point | 1-to-1 | BV2G05130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05130 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G04630 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G04630 | 1 | ||
| Anchor point | 1-to-many | CRU_005G21170 CRU_006G04630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G04630 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G02370 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00019G02370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G02370 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G00890 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G00890 | 1 | ||
| Anchor point | 1-to-1 | CL11G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G00890 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00021G01720 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00021G01720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G01720 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00008G02090 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00008G02090 | 1 | ||
| Anchor point | 1-to-1 | CM00008G02090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00008G02090 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0010G02220 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0010G02220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G02220 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G28620 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G28620 | 1 | ||
| Anchor point | 1-to-1 | FV7G28620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28620 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G42010 GM14G06890 | 2 | |
| Tree-based ortholog | 1-to-many | GM18G03550 GM11G34740 GM02G42010 ... | 4 | ||
| Anchor point | 1-to-many | GM02G42010 GM11G34740 GM18G03550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G03550 GM11G34740 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G27830 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G27830 | 1 | ||
| Anchor point | 1-to-1 | GR11G27830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G27830 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ6G004170 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G004170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G004170 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G046700 MD00G050600 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G046700 MD00G050600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G046700 MD00G050600 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME08265G02740 ME12439G00430 | 2 | |
| Tree-based ortholog | 1-to-many | ME12439G00430 ME08265G02740 | 2 | ||
| Anchor point | 1-to-many | ME12439G00430 ME08265G02740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12439G00430 ME08265G02740 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G069720 MT5G081550 | 2 | |
| Tree-based ortholog | 1-to-many | MT3G069720 MT5G081550 | 2 | ||
| Anchor point | 1-to-1 | MT5G081550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G069720 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G16060 | 1 | |
| Tree-based ortholog | 1-to-many | OS05G16300 OS03G16060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G16060 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT08G06250 PT10G19520 | 2 | |
| Tree-based ortholog | 1-to-many | PT10G19520 PT08G06250 | 2 | ||
| Anchor point | 1-to-1 | PT08G06250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19520 PT08G06250 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G23460 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G23460 | 1 | ||
| Anchor point | 1-to-1 | PPE_002G23460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23460 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29610G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29610G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29610G00070 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL03G078650 SL05G052860 | 2 | |
| Tree-based ortholog | 1-to-many | SL03G078650 SL05G052860 | 2 | ||
| Anchor point | 1-to-1 | SL03G078650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G078650 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST03G018970 ST05G025530 | 2 | |
| Tree-based ortholog | 1-to-many | ST03G018970 ST05G025560 ST05G025530 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G018970 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G37060 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G37060 | 1 | ||
| Anchor point | 1-to-many | TP6G37060 TP5G06750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G37060 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G02720 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G02720 | 1 | ||
| Anchor point | 1-to-1 | TC0010G02720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02720 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G04090 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G04090 | 1 | ||
| Anchor point | 1-to-1 | VV13G04090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04090 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM09G24040 | 1 | |
| Tree-based ortholog | 1-to-many | ZM06G21160 ZM09G24040 ZM01G10900 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G24040 | 1 |