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Integrative Orthology Viewer:
BR10G12000
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR10G12000 | 1 |  |
| Tree-based ortholog | BR02G12430 BR10G12000 | 2 | ||
| Anchor point | BR03G10620 BR02G12430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR10G12000 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00165G00210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00165G00210 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL8G25370 | 1 | |
| Anchor point | many-to-1 | AL8G25370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G25370 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT5G59050 | 1 | |
| Anchor point | many-to-1 | AT5G59050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G59050 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV2G06150 | 1 | |
| Anchor point | many-to-1 | BV2G06150 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-1 | CRU_008G19340 | 1 | |
| Anchor point | many-to-1 | CRU_008G19340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G19340 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00081G00510 | 1 | |
| Anchor point | many-to-1 | CP00081G00510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00081G00510 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL03G01170 | 1 | |
| Anchor point | many-to-many | CL04G07490 CL11G00860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07490 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00026G00380 | 1 | |
| Anchor point | many-to-many | CS00021G01630 CS00026G00380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G00380 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00044G01300 | 1 | |
| Anchor point | many-to-many | CM00008G02060 CM00044G01300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01420 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0010G17290 | 1 | |
| Anchor point | many-to-1 | EG0002G18240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G17290 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV2G41670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G28490 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM11G14300 GM12G06231 GM13G41430 ... | 4 | |
| Anchor point | many-to-many | GM18G03580 GM11G14300 GM12G06231 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G03966 GM13G41430 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR09G09530 GR03G12720 | 2 | |
| Anchor point | many-to-many | GR12G07370 GR09G09530 GR11G27460 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G09530 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ3G045530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G045530 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD11G007150 MD11G019590 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G019590 MD11G007150 | 2 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME03150G00760 ME06512G03030 | 2 | |
| Anchor point | many-to-many | ME08265G02690 ME03150G00760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06512G03030 ME03150G00760 | 2 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT4G064947 MT2G097800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G097800 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS10G29700 | 1 | |
| Anchor point | many-to-1 | OS01G63050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G63050 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT09G03860 | 1 | |
| Anchor point | many-to-many | PT08G06220 PT09G03860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G03860 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_006G06570 | 1 | |
| Anchor point | many-to-1 | PPE_002G23380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G06570 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29751G00460 | 1 | |
| Anchor point | many-to-1 | RC29751G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29751G00460 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL06G076490 | 1 | |
| Anchor point | many-to-1 | SL06G076490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011690 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST06G032290 | 1 | |
| Anchor point | many-to-1 | ST06G032290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G014770 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP6G20920 | 1 | |
| Anchor point | many-to-1 | TP6G20920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G20920 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0009G30650 | 1 | |
| Anchor point | many-to-1 | TC0009G30650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G30650 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV06G02620 | 1 | |
| Anchor point | many-to-many | VV06G02620 VV13G04360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04360 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM08G14320 ZM06G25510 ZM03G26870 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G25510 ZM08G14320 | 2 |