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Integrative Orthology Viewer:
BR10G08340
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR03G49430 BR08G28780 BR09G09350 ... | 4 |  |
| Tree-based ortholog | BR10G08340 | 1 | ||
| Anchor point | BR01G17380 BR08G28770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR10G08340 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00062G00190 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00062G00190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00062G00190 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G14920 AL8G20120 | 2 | |
| Tree-based ortholog | 1-to-1 | AL8G20120 | 1 | ||
| Anchor point | many-to-many | AL7G14920 AL8G20120 AL1G11860 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G20120 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G27070 AT5G54810 | 2 | |
| Tree-based ortholog | 1-to-1 | AT5G54810 | 1 | ||
| Anchor point | many-to-many | AT5G54810 AT4G27070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G54810 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV0G68790 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G68790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G68790 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_007G12980 CRU_008G14710 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_008G14710 | 1 | ||
| Anchor point | many-to-many | CRU_007G12980 CRU_001G10650 CRU_008G14710 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G14710 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00097G00460 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00097G00460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00097G00460 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G04490 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL03G04750 CL05G15790 | 2 | |
| Tree-based ortholog | 1-to-1 | CL05G15790 | 1 | ||
| Anchor point | many-to-1 | CL05G15790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G15790 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00215G00170 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00215G00170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00215G00170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00032G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00032G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00032G00240 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G10380 EG0006G29220 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0006G29220 | 1 | ||
| Anchor point | many-to-1 | EG0006G29220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G29220 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV3G24190 | 1 | |
| Tree-based ortholog | 1-to-many | FV2G26610 FV3G24190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G24190 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G25300 GM11G00580 GM18G12090 | 3 | |
| Tree-based ortholog | 1-to-many | GM18G12090 GM09G15270 GM02G25300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G25300 GM18G12090 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR13G16130 GR13G16140 | 2 | |
| Tree-based ortholog | 1-to-many | GR13G16140 GR13G16130 GR09G42550 | 3 | ||
| Anchor point | many-to-many | GR09G42550 GR13G16130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G16130 GR13G16140 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G001040 LJ6G009490 LJ6G009730 | 3 | |
| Tree-based ortholog | 1-to-1 | LJ6G009490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G009490 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G463080 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G463080 MD00G463070 MD00G350350 ... | 4 | ||
| Anchor point | many-to-1 | MD03G017710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G463080 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME03241G00640 ME03980G00040 | 2 | |
| Tree-based ortholog | 1-to-many | ME03980G00040 ME03241G00640 | 2 | ||
| Anchor point | many-to-1 | ME03241G00640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03241G00640 ME03980G00040 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G049410 MT3G051120 MT5G005670 | 3 | |
| Tree-based ortholog | 1-to-1 | MT3G049410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G049410 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G04180 | 1 | |
| Tree-based ortholog | 1-to-1 | OS08G04180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G04180 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G02870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02870 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00003G02010 PP00027G01070 PP00027G01020 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G02010 PP00012G00570 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G42030 PT11G13600 | 2 | |
| Tree-based ortholog | 1-to-many | PT11G13600 PT01G42030 | 2 | ||
| Anchor point | many-to-many | PT11G13600 PT01G42030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G13600 PT01G42030 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G19910 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G19910 | 1 | ||
| Anchor point | many-to-1 | PPE_004G19910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G19910 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29666G00660 | 1 | |
| Anchor point | many-to-many | RC29842G01270 RC29666G00660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G01270 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G064280 SL10G005320 SL10G006400 ... | 4 | |
| Tree-based ortholog | 1-to-many | SL07G064280 SL10G006400 | 2 | ||
| Anchor point | many-to-many | SL07G064280 SL10G006400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G006400 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST07G025920 ST10G005160 | 2 | |
| Tree-based ortholog | 1-to-many | ST07G025920 ST10G005160 | 2 | ||
| Anchor point | many-to-many | ST10G005160 ST07G025920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G005160 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP6G16750 TP7G25040 | 2 | |
| Tree-based ortholog | 1-to-1 | TP6G16750 | 1 | ||
| Anchor point | many-to-many | TP6G16750 TP7G25040 TP1G10210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G16750 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G04340 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G04340 | 1 | ||
| Anchor point | many-to-1 | TC0007G04340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G04340 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV19G00650 | 1 | |
| Tree-based ortholog | 1-to-1 | VV19G00650 | 1 | ||
| Anchor point | many-to-1 | VV19G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G00650 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G08030 ZM10G11240 | 2 | |
| Tree-based ortholog | 1-to-many | ZM10G11240 ZM04G08030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM10G11240 ZM04G08030 | 2 |