Integrative Orthology Viewer: BR10G00260 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G17240 BR05G14560 BR10G00260 | 3 | |
Tree-based ortholog | BR02G17240 BR10G00260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR10G00260 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00066G02510 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00066G02510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G02510 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G10260 AL8G13720 | 2 | |
Tree-based ortholog | many-to-1 | AL8G13720 | 1 | ||
Anchor point | N/A | AL8G13720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G13720 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G10385 AT5G49830 | 2 | |
Tree-based ortholog | many-to-1 | AT5G49830 | 1 | ||
Anchor point | N/A | AT5G49830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G10385 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G03700 BV7G01640 | 2 | |
Tree-based ortholog | many-to-1 | BV7G01640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G01640 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G09390 CRU_008G09540 | 2 | |
Tree-based ortholog | many-to-1 | CRU_008G09540 | 1 | ||
Anchor point | N/A | CRU_008G09540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G09540 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00005G02900 CP00173G00090 | 2 | |
Tree-based ortholog | many-to-1 | CP00173G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00173G00090 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR12G12330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G12330 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL08G08870 CL09G01190 | 2 | |
Tree-based ortholog | many-to-1 | CL09G01190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G01190 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G03500 CS00346G00080 | 2 | |
Tree-based ortholog | many-to-1 | CS00346G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00346G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00067G00800 CM00096G00050 | 2 | |
Tree-based ortholog | many-to-1 | CM00067G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G00800 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G28110 EG0006G34240 | 2 | |
Tree-based ortholog | many-to-1 | EG0006G34240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G34240 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G18680 FV4G22880 | 2 | |
Tree-based ortholog | many-to-1 | FV0G18680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G18680 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G04650 GM02G02910 GM07G00570 ... | 4 | |
Tree-based ortholog | many-to-many | GM08G23840 GM07G00570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G23840 GM07G00570 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G18890 GR09G11800 GR11G00810 | 3 | |
Tree-based ortholog | many-to-many | GR11G00810 GR09G11800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G11800 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD09G012370 MD13G005620 MD17G012730 | 3 | |
Tree-based ortholog | many-to-many | MD09G012370 MD17G012730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD09G012370 MD17G012730 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME06111G00020 ME11495G00890 | 2 | |
Tree-based ortholog | many-to-1 | ME06111G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06111G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G111120 MT4G005930 MT6G045363 | 3 | |
Tree-based ortholog | many-to-1 | MT4G005930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G005930 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G10110 | 1 | |
Tree-based ortholog | many-to-many | OS03G58970 OS07G10110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G10110 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00073G00870 PP00090G01100 PP00255G00280 ... | 5 | |
Tree-based ortholog | many-to-many | PP00211G00740 PP00090G01100 PP00392G00140 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00211G00740 PP00392G00140 PP00090G01100 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G10470 PT06G19800 PT08G00910 ... | 5 | |
Tree-based ortholog | many-to-many | PT10G24990 PT08G00910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G00910 PT10G24990 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G27590 PPE_003G14940 | 2 | |
Tree-based ortholog | many-to-1 | PPE_003G14940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G14940 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29736G00670 RC30158G00030 | 2 | |
Tree-based ortholog | many-to-1 | RC30158G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30158G00030 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G123870 SL04G005850 | 2 | |
Tree-based ortholog | many-to-1 | SL03G123870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G123870 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G034080 ST04G005530 | 2 | |
Tree-based ortholog | many-to-1 | ST03G034080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G034080 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G08990 TP6G11280 | 2 | |
Tree-based ortholog | many-to-1 | TP6G11280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G11280 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G23540 TC0006G01610 | 2 | |
Tree-based ortholog | many-to-many | TC0006G01640 TC0006G01610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G01610 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G13000 VV09G01300 | 2 | |
Tree-based ortholog | many-to-1 | VV09G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G13000 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G45820 ZM05G02320 ZM07G04200 | 3 | |
Tree-based ortholog | many-to-many | ZM01G44420 ZM05G02320 ZM02G45820 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G02320 | 1 |