Integrative Orthology Viewer: BR09G52980 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G21810 BR07G23600 BR08G30880 ... | 5 | |
Tree-based ortholog | BR08G30880 BR09G52980 | 2 | ||
Anchor point | BR10G02060 BR05G12230 BR08G30880 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G52980 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00141G00150 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00014G01020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00014G01020 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G11870 AL4G16740 AL4G31530 | 3 | |
Tree-based ortholog | many-to-1 | AL1G05190 | 1 | ||
Anchor point | many-to-many | AL1G05190 AL4G16740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G05190 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05630 AT1G65580 AT2G43900 | 3 | |
Tree-based ortholog | many-to-1 | AT1G05630 | 1 | ||
Anchor point | many-to-many | AT2G31830 AT1G05630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05630 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G14630 BV4G14590 | 2 | |
Tree-based ortholog | many-to-1 | BV3G14630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G14630 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04660 CRU_002G10670 CRU_004G25470 | 3 | |
Tree-based ortholog | many-to-1 | CRU_001G04660 | 1 | ||
Anchor point | many-to-many | CRU_001G04660 CRU_004G12740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04660 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP03383G00010 | 1 | |
Tree-based ortholog | many-to-1 | CP03383G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP03383G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G10300 | 1 | |
Tree-based ortholog | many-to-1 | CR12G10300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G10300 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G10010 CL11G07240 | 2 | |
Tree-based ortholog | many-to-1 | CL11G07240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G07240 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G01180 CS00180G00150 | 2 | |
Tree-based ortholog | many-to-1 | CS00180G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00180G00150 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00012G00350 CM00016G01020 | 2 | |
Tree-based ortholog | many-to-1 | CM00016G01020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G01020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G03370 EG0002G11890 EG0154G00020 | 3 | |
Tree-based ortholog | many-to-1 | EG0001G03370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G03370 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G15190 FV6G00340 | 2 | |
Tree-based ortholog | many-to-1 | FV5G15190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15190 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G40360 GM10G31480 GM17G00295 ... | 4 | |
Tree-based ortholog | many-to-many | GM17G00295 GM07G40360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G40360 GM17G00295 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G18670 GR13G13260 | 2 | |
Tree-based ortholog | many-to-1 | GR06G18670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G18670 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G063110 | 1 | |
Manihot esculenta | Orthologous gene family | many-to-many | ME10126G00060 ME10136G00030 | 2 | |
Tree-based ortholog | many-to-many | ME10136G00030 ME10126G00060 ME10136G00040 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10126G00060 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G078100 MT6G092670 | 2 | |
Tree-based ortholog | many-to-1 | MT6G092670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G092670 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS08G41270 OS09G32440 | 2 | |
Tree-based ortholog | many-to-many | OS09G32440 OS08G41270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G41270 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL11G02610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G02170 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-1 | PP00242G00400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00242G00400 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT07G14510 PT08G07930 PT10G17740 ... | 4 | |
Tree-based ortholog | many-to-many | PT17G00690 PT07G14510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G00690 PT07G14510 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_006G36810 PPE_007G07580 | 2 | |
Tree-based ortholog | many-to-1 | PPE_007G07580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G07580 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29929G00070 RC30042G00180 | 2 | |
Tree-based ortholog | many-to-1 | RC30042G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL08G014580 SL11G008800 SL12G019080 ... | 4 | |
Tree-based ortholog | many-to-many | SL12G096660 SL12G019080 SL08G014580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G014580 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST08G010430 ST11G009910 ST12G014500 ... | 4 | |
Tree-based ortholog | many-to-many | ST12G028990 ST12G014500 ST08G010430 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G010430 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04480 TP4G14110 TP4G25990 ... | 4 | |
Tree-based ortholog | many-to-1 | TP1G04480 | 1 | ||
Anchor point | many-to-many | TP1G04480 TP4G14110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04480 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G00230 TC0005G13420 | 2 | |
Tree-based ortholog | many-to-1 | TC0005G00230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G00230 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G08490 VV05G13990 | 2 | |
Tree-based ortholog | many-to-1 | VV05G13990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G08490 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G33050 ZM04G09500 ZM07G18950 | 3 | |
Tree-based ortholog | many-to-many | ZM07G18950 ZM02G33050 ZM01G33370 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G33050 ZM07G18950 | 2 |