Integrative Orthology Viewer: BR09G39450 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR04G01800 BR07G16320 BR09G39450 | 3 | |
Tree-based ortholog | BR04G01800 BR09G39450 | 2 | ||
Anchor point | BR07G16320 BR04G01800 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G39450 BR07G16320 BR04G01800 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00156G00240 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00156G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00156G00240 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G31440 AL5G30350 | 2 | |
Tree-based ortholog | many-to-many | AL5G30350 AL4G31440 | 2 | ||
Anchor point | many-to-many | AL5G30350 AL4G31440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G30350 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G43810 AT3G59810 | 2 | |
Tree-based ortholog | many-to-many | AT3G59810 AT2G43810 | 2 | ||
Anchor point | many-to-many | AT2G43810 AT3G59810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G59810 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G14330 | 1 | |
Tree-based ortholog | many-to-many | BV0G23210 BV1G08180 | 2 | ||
Anchor point | many-to-1 | BV3G14330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G14330 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G25370 CRU_005G25130 | 2 | |
Tree-based ortholog | many-to-1 | CRU_005G25130 | 1 | ||
Anchor point | many-to-many | CRU_005G25130 CRU_004G25370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G25130 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00601G00010 | 1 | |
Tree-based ortholog | many-to-1 | CP00601G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00601G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G02360 | 1 | |
Tree-based ortholog | many-to-1 | CR03G02360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G02360 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL11G11250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL11G11250 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00285G00110 | 1 | |
Tree-based ortholog | many-to-1 | CS00285G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00285G00110 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00053G00480 | 1 | |
Tree-based ortholog | many-to-1 | CM00053G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00053G00480 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G11630 EG0007G11660 EG0007G11670 ... | 4 | |
Tree-based ortholog | many-to-many | EG0007G11610 EG0012G00330 | 2 | ||
Anchor point | many-to-1 | EG0012G00270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0012G00270 EG0007G11630 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G02220 | 1 | |
Tree-based ortholog | many-to-many | FV1G02220 FV4G10660 | 2 | ||
Anchor point | many-to-1 | FV1G02220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G02220 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G39830 GM18G46370 | 2 | |
Tree-based ortholog | many-to-many | GM09G39830 GM18G46370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM09G39830 GM18G46370 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G23270 | 1 | |
Tree-based ortholog | many-to-1 | GR05G00860 | 1 | ||
Anchor point | many-to-1 | GR06G23270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR06G23270 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ5G003390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G003390 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD02G001140 MD15G008220 | 2 | |
Tree-based ortholog | many-to-many | MD02G001140 MD15G008220 | 2 | ||
Anchor point | many-to-many | MD15G008220 MD02G001140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD15G008220 MD02G001140 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01495G00010 ME08884G00060 | 2 | |
Tree-based ortholog | many-to-many | ME08884G00060 ME01495G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME01495G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G080300 | 1 | |
Tree-based ortholog | many-to-1 | MT4G080300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G080300 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G30624 OS04G31950 | 2 | |
Tree-based ortholog | many-to-many | OS04G31950 OS02G30624 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G30624 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL09G03490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL09G03490 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00017G01730 PP00162G00900 | 2 | |
Tree-based ortholog | many-to-many | PP00017G01730 PP00162G00900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00162G00900 PP00017G01730 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G07840 PT10G17870 | 2 | |
Tree-based ortholog | many-to-many | PT10G17870 PT08G07840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT08G07840 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G28370 | 1 | |
Tree-based ortholog | many-to-1 | PPE_007G28370 | 1 | ||
Anchor point | many-to-1 | PPE_007G28370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G28370 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28060G00040 | 1 | |
Tree-based ortholog | many-to-1 | RC28060G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28060G00040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G078450 | 1 | |
Tree-based ortholog | many-to-1 | SL10G081370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G078450 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G020560 | 1 | |
Tree-based ortholog | many-to-1 | ST10G026740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G020560 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G25890 TP5G03330 | 2 | |
Tree-based ortholog | many-to-1 | TP5G03330 | 1 | ||
Anchor point | many-to-many | TP5G03330 TP4G25890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G03330 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G16700 | 1 | |
Tree-based ortholog | many-to-1 | TC0004G16700 | 1 | ||
Anchor point | many-to-1 | TC0004G16700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G16700 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G13610 | 1 | |
Tree-based ortholog | many-to-1 | VV05G13610 | 1 | ||
Anchor point | many-to-1 | VV05G13610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G13610 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM05G28870 ZM10G15410 | 2 | |
Tree-based ortholog | many-to-1 | ZM05G28870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM10G15410 | 1 |