Integrative Orthology Viewer: BR09G35090 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR04G04920 BR09G35090 | 2 | |
Tree-based ortholog | BR04G04920 BR09G35090 | 2 | ||
Anchor point | BR04G04920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G35090 BR04G04920 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G02490 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00029G02490 | 1 | ||
Anchor point | 1-to-1 | ATR_00029G02490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00029G02490 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G24100 | 1 | |
Tree-based ortholog | many-to-1 | AL5G24100 | 1 | ||
Anchor point | 1-to-1 | AL5G24100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G24100 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G54050 | 1 | |
Tree-based ortholog | many-to-1 | AT3G54050 | 1 | ||
Anchor point | 1-to-1 | AT3G54050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G54050 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G20500 | 1 | |
Tree-based ortholog | many-to-1 | BV5G20500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G20500 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G19420 | 1 | |
Tree-based ortholog | many-to-1 | CRU_005G19420 | 1 | ||
Anchor point | 1-to-1 | CRU_005G19420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G19420 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00056G00690 | 1 | |
Tree-based ortholog | many-to-1 | CP00056G00690 | 1 | ||
Anchor point | 1-to-1 | CP00056G00690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00056G00690 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G03270 | 1 | |
Tree-based ortholog | many-to-1 | CR12G03270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G03270 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G07330 | 1 | |
Tree-based ortholog | many-to-1 | CL04G07330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G07330 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00083G00450 | 1 | |
Tree-based ortholog | many-to-1 | CS00083G00450 | 1 | ||
Anchor point | 1-to-many | CS00083G00450 CS00002G00840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00083G00450 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00002G01570 CM00002G01580 | 2 | |
Tree-based ortholog | many-to-1 | CM00002G01570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00002G01570 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G22500 EG0002G22510 | 2 | |
Tree-based ortholog | many-to-1 | EG0002G22500 | 1 | ||
Anchor point | 1-to-1 | EG0002G22500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G22500 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G11550 | 1 | |
Tree-based ortholog | many-to-1 | FV6G11550 | 1 | ||
Anchor point | 1-to-1 | FV6G11550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G11550 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G17180 GM18G41940 | 2 | |
Tree-based ortholog | many-to-many | GM07G17180 GM18G41940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM18G41940 GM07G17180 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G37780 GR12G11010 | 2 | |
Tree-based ortholog | many-to-1 | GR07G37780 | 1 | ||
Anchor point | 1-to-many | GR07G37780 GR12G11010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G37780 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G044640 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G044640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G044640 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G011540 MD12G016630 | 2 | |
Tree-based ortholog | many-to-many | MD04G011540 MD12G016630 | 2 | ||
Anchor point | 1-to-1 | MD12G016620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G011540 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03651G00330 ME08379G00050 | 2 | |
Tree-based ortholog | many-to-many | ME08379G00050 ME03651G00330 | 2 | ||
Anchor point | 1-to-1 | ME03651G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME08379G00050 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G066120 | 1 | |
Tree-based ortholog | many-to-1 | MT7G066120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G066120 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G16050 | 1 | |
Tree-based ortholog | many-to-1 | OS03G16050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G16050 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL03G00280 | 1 | |
Tree-based ortholog | many-to-1 | OL03G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G00280 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00020G01780 PP00153G00150 | 2 | |
Tree-based ortholog | many-to-many | PP00153G00150 PP00020G01780 PP00031G00050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00153G00150 PP00020G01780 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT16G10690 PT16G10890 PT16G10900 | 3 | |
Tree-based ortholog | many-to-many | PT16G10890 PT16G10690 PT06G09440 | 3 | ||
Anchor point | 1-to-many | PT06G09440 PT16G10690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT16G10890 PT16G10690 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G27490 | 1 | |
Tree-based ortholog | many-to-1 | PPE_006G27490 | 1 | ||
Anchor point | 1-to-1 | PPE_006G27490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G27490 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC27798G00280 | 1 | |
Tree-based ortholog | many-to-1 | RC27798G00280 | 1 | ||
Anchor point | 1-to-1 | RC27798G00280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27798G00280 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G011810 SL10G086720 SL10G086730 | 3 | |
Tree-based ortholog | many-to-1 | SL10G086720 | 1 | ||
Anchor point | 1-to-many | SL10G086720 SL09G011810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G011810 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST09G012120 ST10G027770 ST10G027780 | 3 | |
Tree-based ortholog | many-to-1 | ST10G027780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G012120 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G08330 | 1 | |
Tree-based ortholog | many-to-many | TP5G08330 TP0G04850 | 2 | ||
Anchor point | 1-to-1 | TP5G08330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G08330 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G02450 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G02450 | 1 | ||
Anchor point | 1-to-1 | TC0005G02440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G02450 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G13520 VV08G13550 | 2 | |
Tree-based ortholog | many-to-1 | VV08G13550 | 1 | ||
Anchor point | 1-to-1 | VV08G13550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G13550 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G10880 | 1 | |
Tree-based ortholog | many-to-1 | ZM01G10880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G10880 | 1 |