Integrative Orthology Viewer: BR09G35020 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR07G14000 BR09G35020 | 2 | |
Tree-based ortholog | BR07G14000 BR09G35020 | 2 | ||
Anchor point | BR07G14000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G35020 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00012G03430 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00012G03430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00012G03430 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G23940 | 1 | |
Tree-based ortholog | many-to-1 | AL5G23940 | 1 | ||
Anchor point | 1-to-1 | AL5G23940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G23940 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G53900 | 1 | |
Tree-based ortholog | many-to-1 | AT3G53900 | 1 | ||
Anchor point | 1-to-1 | AT3G53900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G53900 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G66210 | 1 | |
Tree-based ortholog | many-to-many | BV0G66210 BV0G35780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G66210 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_005G19250 | 1 | |
Tree-based ortholog | many-to-1 | CRU_005G19250 | 1 | ||
Anchor point | 1-to-1 | CRU_005G19250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G19250 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00056G00220 | 1 | |
Tree-based ortholog | many-to-many | CP00056G00260 CP00056G00220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00220 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR11G02510 | 1 | |
Tree-based ortholog | many-to-1 | CR11G02510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G02510 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G07750 | 1 | |
Tree-based ortholog | many-to-1 | CL04G07750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07750 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS01396G00010 | 1 | |
Tree-based ortholog | many-to-1 | CS01396G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS01396G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00002G01030 | 1 | |
Tree-based ortholog | many-to-1 | CM00002G01030 | 1 | ||
Anchor point | 1-to-1 | CM00002G01030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G22180 | 1 | |
Tree-based ortholog | many-to-1 | EG0002G22180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G22180 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G12210 | 1 | |
Tree-based ortholog | many-to-1 | FV6G12210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G12210 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G24520 GM03G12260 | 2 | |
Tree-based ortholog | many-to-many | GM01G24520 GM03G12260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G12260 GM01G24520 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR06G17020 | 1 | |
Tree-based ortholog | many-to-1 | GR06G17020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G17020 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G050310 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G180840 MD00G180850 | 2 | |
Tree-based ortholog | many-to-many | MD00G180840 MD12G013880 MD00G180850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G180840 MD00G180850 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME07465G00020 | 1 | |
Tree-based ortholog | many-to-1 | ME07465G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07465G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G020090 | 1 | |
Tree-based ortholog | many-to-1 | MT4G020090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G020090 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G38170 | 1 | |
Tree-based ortholog | many-to-1 | OS05G38170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G38170 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL07G03500 | 1 | |
Tree-based ortholog | many-to-1 | OL07G03500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G03500 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00131G00040 | 1 | |
Tree-based ortholog | many-to-1 | PP00131G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00131G00040 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G09100 | 1 | |
Tree-based ortholog | many-to-1 | PT06G09100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G09100 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G27000 | 1 | |
Tree-based ortholog | many-to-1 | PPE_006G27000 | 1 | ||
Anchor point | 1-to-1 | PPE_006G27000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27000 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29973G00120 | 1 | |
Tree-based ortholog | many-to-1 | RC29973G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29973G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G011300 | 1 | |
Tree-based ortholog | many-to-1 | SL09G011300 | 1 | ||
Anchor point | 1-to-1 | SL09G011300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011300 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G008660 | 1 | |
Tree-based ortholog | many-to-1 | ST09G008660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G008660 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G08500 | 1 | |
Tree-based ortholog | many-to-1 | TP5G08500 | 1 | ||
Anchor point | 1-to-1 | TP5G08480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08500 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G03040 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G03040 | 1 | ||
Anchor point | 1-to-1 | TC0005G03040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G03040 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G13910 | 1 | |
Tree-based ortholog | many-to-1 | VV08G13910 | 1 | ||
Anchor point | 1-to-1 | VV08G13910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13910 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM06G25640 | 1 | |
Tree-based ortholog | many-to-1 | ZM06G25640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G25640 | 1 |