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Integrative Orthology Viewer:
BR09G32990
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR09G32990 | 1 |  |
| Tree-based ortholog | BR09G32990 | 1 | ||
| Anchor point | BR03G41970 BR01G02560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR09G32990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00001G01010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00001G01010 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G20990 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G20970 | 1 | ||
| Anchor point | many-to-many | AL7G04880 AL5G20970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G20970 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G51340 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G51340 | 1 | ||
| Anchor point | many-to-many | AT4G35880 AT3G51330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G51350 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV6G08850 BV6G08840 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G08840 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_005G16590 | 1 | |
| Anchor point | many-to-many | CRU_003G30680 CRU_005G16590 CRU_007G04070 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G16590 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00006G02990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G02990 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G11180 | 1 | |
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G01660 | 1 | |
| Anchor point | many-to-many | CL01G20720 CL10G01660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G01660 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00017G01680 | 1 | |
| Anchor point | many-to-1 | CS00017G01680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G01680 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00021G00530 | 1 | |
| Anchor point | many-to-many | CM00007G09710 CM00021G00530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G00530 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0010G21550 EG0009G19450 | 2 | |
| Anchor point | many-to-many | EG0010G21550 EG0009G19450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G21550 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV1G13040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G13040 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM16G23140 GM02G05060 GM11G08530 ... | 4 | |
| Anchor point | many-to-many | GM11G08530 GM16G23120 GM02G05050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM16G23140 GM02G05060 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G19140 GR03G00650 | 2 | |
| Anchor point | many-to-many | GR03G00640 GR07G19120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR03G00650 GR07G19140 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G010530 LJ2G028970 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G028970 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD03G010360 MD11G011970 | 2 | |
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME06512G01520 | 1 | |
| Anchor point | many-to-many | ME07520G03000 ME06512G01520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06512G01520 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G075090 MT5G022880 | 2 | |
| Anchor point | many-to-many | MT8G075010 MT5G022880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G075090 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS04G15790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G37012 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00006G00100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00006G00100 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT05G10870 | 1 | |
| Anchor point | many-to-1 | PT05G10870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G06380 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_007G19450 | 1 | |
| Anchor point | many-to-1 | PPE_007G19450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G19450 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC28693G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28693G00020 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL03G033360 SL02G083460 | 2 | |
| Anchor point | many-to-many | SL03G033360 SL02G083450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G083460 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST03G009000 ST02G026750 | 2 | |
| Anchor point | many-to-many | ST02G026740 ST03G009000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G026750 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP5G10890 | 1 | |
| Anchor point | many-to-many | TP7G33660 TP5G10870 TP3G31170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10890 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G01200 | 1 | |
| Anchor point | many-to-1 | TC0001G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G01200 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G18890 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G18890 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM02G18870 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G18870 | 1 |