Integrative Orthology Viewer: BR09G14650 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G25310 BR01G25340 BR09G14650 | 3 | |
Tree-based ortholog | BR01G25260 BR01G25340 BR01G25310 ... | 5 | ||
Anchor point | BR01G25260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G14650 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00019G00520 ATR_00033G01890 | 2 | |
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G05550 AL2G05560 AL2G05590 ... | 5 | |
Tree-based ortholog | many-to-many | AL2G05560 AL2G05610 AL2G05600 ... | 4 | ||
Anchor point | 1-to-1 | AL2G05550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G05600 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G60500 AT1G60530 | 2 | |
Tree-based ortholog | many-to-1 | AT1G60500 | 1 | ||
Anchor point | 1-to-1 | AT1G60500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G60500 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G62130 | 1 | |
Tree-based ortholog | many-to-1 | BV0G62130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G62130 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G04500 CRU_002G04540 CRU_002G04550 | 3 | |
Tree-based ortholog | many-to-many | CRU_002G04540 CRU_002G04550 CRU_002G04500 ... | 4 | ||
Anchor point | 1-to-1 | CRU_002G04500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G04500 | 1 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00020G00230 | 1 | |
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR05G01360 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G07100 CL11G03490 | 2 | |
Tree-based ortholog | many-to-1 | CL11G03490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G03490 | 1 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00025G01120 | 1 | |
Cucumis melo | Orthologous gene family | many-to-many | CM00001G08100 CM00009G00760 | 2 | |
Tree-based ortholog | many-to-1 | CM00009G00760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00009G00760 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G11370 EG0002G11410 EG0002G11420 ... | 22 | |
Tree-based ortholog | many-to-many | EG0002G13440 EG0002G11410 EG0002G11460 ... | 22 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G11470 EG0002G11500 EG0004G10690 ... | 16 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV7G16110 FV7G16150 | 2 | |
Tree-based ortholog | many-to-many | FV7G15480 FV7G16110 FV4G21930 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G21930 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G29541 GM08G12710 GM13G29630 ... | 4 | |
Tree-based ortholog | many-to-many | GM05G29541 GM08G12710 GM13G29630 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G29541 GM08G12710 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR13G00630 GR13G00640 GR13G00660 ... | 4 | |
Tree-based ortholog | many-to-many | GR13G00640 GR13G00670 GR13G00660 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G00640 GR13G00660 GR13G00630 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ4G042350 LJ5G023200 | 2 | |
Tree-based ortholog | many-to-many | LJ5G023200 LJ4G042350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ4G042350 LJ5G023200 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G050570 MD00G155910 MD00G155920 ... | 16 | |
Tree-based ortholog | many-to-many | MD00G444540 MD00G446850 MD14G000680 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G000670 MD14G000650 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03614G01620 | 1 | |
Tree-based ortholog | many-to-many | ME02264G00530 ME03614G01620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G01620 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT8G087750 MT8G087770 | 2 | |
Tree-based ortholog | many-to-many | MT8G087763 MT8G087770 MT8G087750 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G087750 MT8G087770 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G15420 OS04G04060 | 2 | |
Tree-based ortholog | many-to-many | OS03G15420 OS04G04060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G15420 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04010 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00153G00010 PP00153G00020 PP00153G00030 ... | 7 | |
Tree-based ortholog | many-to-many | PP00153G00070 PP00153G00080 PP00153G00020 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00153G00010 PP00153G00050 PP00153G00080 ... | 7 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G09590 PT03G02420 PT03G02460 ... | 8 | |
Tree-based ortholog | many-to-many | PT13G12000 PT13G11990 PT13G12460 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G02460 PT03G02490 PT03G02480 ... | 4 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G02440 PPE_002G02480 PPE_002G02540 ... | 7 | |
Tree-based ortholog | many-to-many | PPE_002G02550 PPE_002G02510 PPE_002G02540 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G01590 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30128G04040 RC30148G00060 | 2 | |
Tree-based ortholog | many-to-many | RC30128G04040 RC30148G00080 RC30148G00060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G04040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G069980 | 1 | |
Tree-based ortholog | many-to-many | SL04G072030 SL11G070010 SL11G069980 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G072030 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G026310 ST04G026370 ST04G026410 ... | 4 | |
Tree-based ortholog | many-to-many | ST04G026410 ST04G026370 ST04G026310 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G026410 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G04220 TP2G04230 | 2 | |
Tree-based ortholog | many-to-many | TP2G04230 TP2G04220 | 2 | ||
Anchor point | 1-to-1 | TP2G04220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G04230 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G20550 TC0005G20570 TC0005G20580 ... | 5 | |
Tree-based ortholog | many-to-many | TC0005G20580 TC0005G20600 TC0005G20590 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0005G20590 TC0005G20580 TC0005G20570 ... | 5 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G01810 | 1 | |
Zea mays | Orthologous gene family | many-to-many | ZM01G10330 ZM01G10340 | 2 | |
Tree-based ortholog | many-to-many | ZM01G10330 ZM01G10340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G10330 | 1 |