Integrative Orthology Viewer: BR09G14480 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G25500 BR01G25510 BR09G14480 ... | 5 | |
Tree-based ortholog | BR01G25500 BR09G14480 | 2 | ||
Anchor point | BR01G25500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR01G25510 BR09G14480 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00062G01290 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00002G05780 ATR_00002G05770 ATR_00002G05760 | 3 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G10960 AL2G05310 AL2G05320 ... | 5 | |
Tree-based ortholog | many-to-1 | AL1G10960 | 1 | ||
Anchor point | 1-to-many | AL1G10960 AL2G05310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL2G05320 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G10810 AT1G60680 AT1G60690 ... | 6 | |
Tree-based ortholog | many-to-1 | AT1G60750 | 1 | ||
Anchor point | 1-to-many | AT1G10810 AT1G60680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G60750 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G00840 BV3G00860 BV3G00870 ... | 5 | |
Tree-based ortholog | many-to-many | BV3G00890 BV3G00880 BV3G00840 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G00890 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_002G04360 CRU_002G04370 CRU_002G04380 | 3 | |
Tree-based ortholog | many-to-1 | CRU_002G04360 | 1 | ||
Anchor point | 1-to-1 | CRU_002G04360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G04360 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00007G02560 | 1 | |
Tree-based ortholog | many-to-1 | CP00007G02560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00007G02560 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR11G00990 | 1 | |
Tree-based ortholog | many-to-1 | CR11G00990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR11G00990 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL07G17730 CL07G17830 | 2 | |
Tree-based ortholog | many-to-1 | CL07G17830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL07G17830 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00182G00170 CS00220G00030 CS00220G00040 ... | 4 | |
Tree-based ortholog | many-to-many | CS00616G00040 CS10258G00010 CS00616G00020 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CS00220G00040 CS00182G00170 | 2 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00031G01940 CM00031G02070 CM00031G02080 | 3 | |
Tree-based ortholog | many-to-many | CM00031G02080 CM00031G02070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00031G01940 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G04060 EG0008G04070 EG0008G04090 ... | 17 | |
Tree-based ortholog | many-to-many | EG4772G00010 EG0008G04240 EG0008G04270 ... | 27 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG2134G00010 EG0123G00020 EG0008G04070 ... | 14 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV4G08240 | 1 | |
Tree-based ortholog | many-to-1 | FV4G08240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV4G08240 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G40790 GM06G40800 GM08G29130 | 3 | |
Tree-based ortholog | many-to-many | GM06G40790 GM06G40800 GM08G29130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM06G40800 GM08G29130 GM06G40790 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G22670 GR11G14730 | 2 | |
Tree-based ortholog | many-to-many | GR06G22660 GR06G22670 GR11G14730 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR11G14730 | 1 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G007050 | 1 | |
Malus domestica | Orthologous gene family | many-to-many | MD00G476190 MD00G476220 MD09G002180 ... | 6 | |
Tree-based ortholog | many-to-many | MD00G419380 MD00G377770 MD00G200260 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD09G013590 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME03802G00790 ME00821G00070 ME03802G00780 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03802G00780 ME00821G00070 ME03802G00750 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT7G021680 MT7G021820 MT7G021850 | 3 | |
Tree-based ortholog | many-to-many | MT7G021820 MT7G021680 MT7G021670 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G021680 MT7G021820 MT7G021850 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G26870 OS04G26910 OS04G27060 | 3 | |
Tree-based ortholog | many-to-many | OS04G26890 OS04G26920 OS04G26910 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS04G26910 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL10G00730 OL16G02330 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OL06G04510 OL03G00130 | 2 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00017G01590 PP00228G00050 PP00228G00080 | 3 | |
Tree-based ortholog | many-to-many | PP00309G00020 PP00158G00480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00017G01590 PP00228G00080 PP00228G00050 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G14950 PT02G23400 PT02G23410 ... | 6 | |
Tree-based ortholog | many-to-many | PT00G14950 PT02G23430 PT02G23400 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT14G14770 PT02G23430 PT00G14950 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G16740 PPE_001G16750 PPE_001G16760 ... | 4 | |
Tree-based ortholog | many-to-many | PPE_002G03930 PPE_001G16760 PPE_001G16750 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G16760 PPE_001G16740 PPE_001G16770 ... | 4 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30065G00020 | 1 | |
Tree-based ortholog | many-to-many | RC46317G00010 RC29954G00020 RC30201G00010 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30065G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G097970 SL09G097980 SL09G098000 ... | 4 | |
Tree-based ortholog | many-to-many | SL09G097960 SL09G097980 SL09G097970 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL09G097960 SL09G097970 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST09G030230 ST09G030250 ST09G030260 ... | 7 | |
Tree-based ortholog | many-to-many | ST09G030230 ST09G030300 ST09G030260 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G030230 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G04010 TP2G04020 TP2G04030 ... | 4 | |
Tree-based ortholog | many-to-1 | TP2G04010 | 1 | ||
Anchor point | 1-to-many | TP2G04010 TP1G09510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G04030 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G19220 TC0004G19230 TC0004G19250 ... | 5 | |
Tree-based ortholog | many-to-many | TC0004G19290 TC0004G19280 TC0004G19220 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0004G19270 TC0004G19250 | 2 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G10510 VV05G10530 VV05G10540 | 3 | |
Tree-based ortholog | many-to-1 | VV05G10540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV05G10530 VV05G10510 | 2 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM01G34180 | 1 | |
Tree-based ortholog | many-to-many | ZM06G07600 ZM01G34180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G34180 | 1 |