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Integrative Orthology Viewer:
BR09G10930
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR05G14910 BR09G10930 BR09G13380 | 3 |  |
| Tree-based ortholog | BR09G10930 BR09G13380 | 2 | ||
| Anchor point | BR09G49730 BR09G13380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR09G10930 BR09G13380 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00011G01490 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00011G01490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00011G01490 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G12640 | 1 | |
| Anchor point | many-to-1 | AL1G12640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G12640 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G12270 AT1G62740 AT4G12400 | 3 | |
| Tree-based ortholog | many-to-1 | AT1G62740 | 1 | ||
| Anchor point | many-to-1 | AT1G62740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT1G62740 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV5G16660 | 1 | |
| Tree-based ortholog | many-to-1 | BV5G16660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G16660 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_002G02120 CRU_006G30380 | 2 | |
| Tree-based ortholog | many-to-1 | CRU_002G02120 | 1 | ||
| Anchor point | many-to-1 | CRU_002G02120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_002G02120 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00029G01020 | 1 | |
| Tree-based ortholog | many-to-1 | CP00029G01020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00029G01020 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR03G02130 CR03G02230 CR03G10590 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR03G10590 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G03030 | 1 | |
| Tree-based ortholog | many-to-1 | CL10G03030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL10G03030 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-1 | CS00271G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00271G00170 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00021G02930 | 1 | |
| Tree-based ortholog | many-to-1 | CM00021G02930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00021G02930 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G16510 | 1 | |
| Tree-based ortholog | many-to-1 | EG0004G16510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0004G16510 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV5G00480 | 1 | |
| Tree-based ortholog | many-to-1 | FV5G00480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G00480 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G42010 GM05G04220 GM11G03330 ... | 4 | |
| Tree-based ortholog | many-to-many | GM01G42010 GM11G03330 GM05G04220 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G03330 GM01G42010 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G21230 GR07G02080 | 2 | |
| Tree-based ortholog | many-to-many | GR06G21230 GR07G02080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G02080 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G034940 | 1 | |
| Tree-based ortholog | many-to-1 | LJ2G034940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G034940 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G203780 MD04G004770 MD10G015050 | 3 | |
| Tree-based ortholog | many-to-many | MD10G015050 MD00G203780 MD04G004770 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G004770 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME07035G01050 ME08559G00020 | 2 | |
| Tree-based ortholog | many-to-many | ME08559G00020 ME07035G01050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME07035G01050 ME08559G00020 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT5G012030 | 1 | |
| Tree-based ortholog | many-to-1 | MT5G012030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G012030 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G43020 OS04G45480 | 2 | |
| Tree-based ortholog | many-to-many | OS02G43020 OS04G45480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G43020 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL06G00580 OL09G01020 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL06G00580 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00031G02130 PP00042G00630 | 2 | |
| Tree-based ortholog | many-to-many | PP00042G00630 PP00031G02130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00042G00630 PP00031G02130 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G11950 PT03G11340 | 2 | |
| Tree-based ortholog | many-to-many | PT01G11950 PT03G11340 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT01G11950 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_005G08350 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_005G08350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G08350 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30190G01620 | 1 | |
| Tree-based ortholog | many-to-1 | RC30190G01620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30190G01620 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL08G079170 | 1 | |
| Tree-based ortholog | many-to-1 | SL08G079170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G079170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST08G005440 ST08G025030 | 2 | |
| Tree-based ortholog | many-to-many | ST08G005520 ST08G005440 ST08G025030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G025030 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10890 TP2G01900 TP6G05150 | 3 | |
| Tree-based ortholog | many-to-1 | TP2G01900 | 1 | ||
| Anchor point | many-to-many | TP2G01900 TP1G10890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G01900 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G25480 | 1 | |
| Tree-based ortholog | many-to-1 | TC0003G25480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0003G25480 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV00G09470 VV00G17570 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV00G09470 VV00G17570 | 2 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G08420 ZM04G20000 ZM05G35000 | 3 | |
| Tree-based ortholog | many-to-many | ZM04G20000 ZM05G35000 ZM02G08420 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G35000 ZM04G20000 | 2 |