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Integrative Orthology Viewer:
BR09G09900
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR07G01790 BR09G09900 | 2 |  |
| Tree-based ortholog | BR07G01790 BR09G09900 | 2 | ||
| Anchor point | BR07G01790 BR06G24050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR07G01790 BR09G09900 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00019G01480 ATR_00019G01470 | 2 | |
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G39870 | 1 | |
| Tree-based ortholog | many-to-many | AL3G39880 AL3G30720 AL3G39870 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G39880 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G18680 | 1 | |
| Tree-based ortholog | many-to-many | AT2G18690 AT2G18680 | 2 | ||
| Anchor point | many-to-1 | AT2G18680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G18680 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G73850 | 1 | |
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G31710 | 1 | |
| Tree-based ortholog | many-to-many | CRU_003G31730 CRU_003G25540 CRU_003G31710 ... | 4 | ||
| Anchor point | many-to-1 | CRU_003G31710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G31710 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-many | CP29666G00020 CP00075G00090 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP29666G00020 CP00075G00090 | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL08G03950 | 1 | |
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00004G05270 | 1 | |
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G05130 | 1 | |
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0003G01670 | 1 | |
| Anchor point | many-to-1 | EG0003G01670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G01670 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G10940 | 1 | |
| Glycine max | Tree-based ortholog | many-to-1 | GM13G29880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM13G29880 | 1 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR12G03540 | 1 | |
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G003700 | 1 | |
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G342660 MD05G025610 MD10G000750 | 3 | |
| Manihot esculenta | Tree-based ortholog | many-to-1 | ME07335G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07335G00020 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT7G021620 MT4G096890 | 2 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G04339 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00103G00360 PP00263G00160 PP00054G01330 | 3 | |
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT10G25030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT10G25030 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-many | PPE_001G08910 PPE_001G08920 PPE_001G08900 | 3 | |
| Anchor point | many-to-1 | PPE_001G08900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G08900 PPE_001G08920 | 2 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC28597G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28597G00020 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL07G006420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G006420 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST07G005470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G005470 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G32170 | 1 | |
| Tree-based ortholog | many-to-1 | TP3G32170 | 1 | ||
| Anchor point | many-to-1 | TP3G32170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G32170 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-many | TC0009G15690 TC0009G15710 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0009G15710 TC0009G15690 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV01G09470 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G00190 | 1 | |