Integrative Orthology Viewer: BR09G08070 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR01G21900 BR02G41570 BR07G11870 ... | 4 | |
Tree-based ortholog | BR07G11870 BR09G08070 | 2 | ||
Anchor point | BR07G11870 BR02G41570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR07G11870 BR02G41570 BR09G08070 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00059G01780 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00059G01780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00059G01780 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G20400 AL7G03840 AL8G34100 | 3 | |
Tree-based ortholog | many-to-many | AL8G34100 AL1G53450 | 2 | ||
Anchor point | many-to-many | AL7G03840 AL8G34100 AL5G20400 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL8G34100 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G50820 AT5G66570 | 2 | |
Tree-based ortholog | many-to-1 | AT5G66570 | 1 | ||
Anchor point | many-to-many | AT3G50820 AT5G66570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G66570 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G12540 | 1 | |
Tree-based ortholog | many-to-1 | BV4G12540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV4G12540 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G16070 CRU_008G27090 | 2 | |
Tree-based ortholog | many-to-1 | CRU_008G27090 | 1 | ||
Anchor point | many-to-many | CRU_008G27090 CRU_005G16070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G27090 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00015G00810 | 1 | |
Tree-based ortholog | many-to-1 | CP00015G00810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00015G00810 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G07240 | 1 | |
Tree-based ortholog | many-to-1 | CR09G07240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR09G07240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G16600 | 1 | |
Tree-based ortholog | many-to-1 | CL01G16600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G16600 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00006G02870 | 1 | |
Tree-based ortholog | many-to-1 | CS00006G02870 | 1 | ||
Anchor point | many-to-1 | CS00006G02870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00006G02870 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00007G05350 | 1 | |
Tree-based ortholog | many-to-1 | CM00007G05350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G05350 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G07950 | 1 | |
Tree-based ortholog | many-to-1 | EG0009G07950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G07950 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G37500 | 1 | |
Tree-based ortholog | many-to-1 | FV5G37500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV5G37500 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G38750 GM02G06830 GM11G06510 ... | 4 | |
Tree-based ortholog | many-to-many | GM01G38750 GM11G06510 GM02G06830 ... | 4 | ||
Anchor point | many-to-many | GM02G06830 GM01G38750 GM11G06510 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM01G38750 GM11G06510 GM16G25860 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR07G20800 | 1 | |
Tree-based ortholog | many-to-1 | GR07G20800 | 1 | ||
Anchor point | many-to-1 | GR07G20800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G20800 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G031540 LJ4G016880 | 2 | |
Tree-based ortholog | many-to-many | LJ2G031540 LJ4G016880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G016880 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G133400 MD15G020320 | 2 | |
Tree-based ortholog | many-to-many | MD15G020320 MD00G133400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD15G020320 MD00G133400 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME09274G00180 ME09837G00020 | 2 | |
Tree-based ortholog | many-to-many | ME09837G00020 ME09274G00180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09837G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G018670 MT8G078870 | 2 | |
Tree-based ortholog | many-to-many | MT5G018670 MT8G078870 | 2 | ||
Anchor point | many-to-1 | MT8G078870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G078870 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G31690 | 1 | |
Tree-based ortholog | many-to-1 | OS01G31690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G31690 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL20G00150 | 1 | |
Tree-based ortholog | many-to-1 | OL20G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G00150 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00025G00300 PP00060G00290 PP00306G00520 ... | 4 | |
Tree-based ortholog | many-to-many | PP00025G00300 PP00421G00030 PP00060G00290 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00306G00520 PP00025G00300 PP00421G00030 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G13040 PT07G03370 | 2 | |
Tree-based ortholog | many-to-many | PT07G03370 PT05G13040 | 2 | ||
Anchor point | many-to-many | PT07G03370 PT05G13040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G03370 PT05G13040 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G16750 | 1 | |
Tree-based ortholog | many-to-1 | PPE_007G16750 | 1 | ||
Anchor point | many-to-1 | PPE_007G16750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G16750 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29676G00840 | 1 | |
Tree-based ortholog | many-to-1 | RC29676G00840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29676G00840 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G065400 SL02G090030 | 2 | |
Tree-based ortholog | many-to-many | SL02G065400 SL07G032640 SL00G005900 ... | 6 | ||
Anchor point | many-to-many | SL02G090030 SL02G065400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL02G090030 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G012180 ST02G032940 | 2 | |
Tree-based ortholog | many-to-many | ST02G012180 ST02G032940 | 2 | ||
Anchor point | many-to-many | ST02G012180 ST02G032940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G012180 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G30140 TP5G11400 TP7G34560 | 3 | |
Tree-based ortholog | many-to-1 | TP2G30140 | 1 | ||
Anchor point | many-to-many | TP7G34560 TP5G11400 TP2G30140 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP2G30140 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G04300 | 1 | |
Tree-based ortholog | many-to-1 | TC0001G04300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G04300 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G08160 | 1 | |
Tree-based ortholog | many-to-1 | VV18G08160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV18G08160 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM05G13930 ZM06G11130 | 2 | |
Tree-based ortholog | many-to-many | ZM05G13930 ZM06G11130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G13930 ZM06G11130 | 2 |