Integrative Orthology Viewer: BR09G06720 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G03520 BR03G01270 BR09G06720 ... | 4 | |
Tree-based ortholog | BR02G03520 BR09G06720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G06720 BR02G03520 BR06G22170 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G11300 AL3G10380 AL6G03130 ... | 4 | |
Tree-based ortholog | many-to-many | AL3G10380 AL6G03130 AL2G11300 ... | 4 | ||
Anchor point | N/A | AL8G30800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL2G11300 AL8G30800 AL6G03130 ... | 4 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G10090 AT5G03850 AT5G64140 | 3 | |
Tree-based ortholog | many-to-1 | AT5G64140 | 1 | ||
Anchor point | N/A | AT5G64140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G03850 AT3G10090 | 2 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G10290 BV1G01360 | 2 | |
Tree-based ortholog | many-to-many | BV0G10290 BV1G01360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV0G10290 BV1G01360 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G08880 CRU_006G02740 | 2 | |
Tree-based ortholog | many-to-many | CRU_006G02740 CRU_003G08880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_006G02740 CRU_003G08880 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00001G03740 CP00009G03630 CP00077G00970 | 3 | |
Tree-based ortholog | many-to-many | CP00001G03740 CP00077G00970 CP00009G03630 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CP00077G00970 CP00001G03740 | 2 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G03310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G03310 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G00230 CL04G05680 CL06G15530 | 3 | |
Tree-based ortholog | many-to-many | CL04G00230 CL06G15530 CL04G05680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL06G15530 CL04G05680 CL04G00230 | 3 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00018G01630 | 1 | |
Tree-based ortholog | many-to-1 | CS00018G01630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00018G01630 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00030G02190 CM00030G02200 CM00058G00340 | 3 | |
Tree-based ortholog | many-to-many | CM00030G02190 CM00030G02200 CM00058G00340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CM00058G00340 CM00030G02200 CM00030G02190 | 3 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G00750 | 1 | |
Tree-based ortholog | many-to-1 | EG0005G00750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G00750 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV5G13080 FV6G28050 | 2 | |
Tree-based ortholog | many-to-many | FV6G28050 FV5G13080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G28120 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G36420 GM03G36580 GM13G37601 ... | 5 | |
Tree-based ortholog | many-to-many | GM19G39070 GM03G36580 GM13G37601 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G39070 GM03G36420 GM13G37601 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G15440 GR05G00570 GR06G14590 | 3 | |
Tree-based ortholog | many-to-many | GR05G00570 GR02G15440 GR06G14590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR06G14590 GR05G00570 GR02G15440 | 3 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G281750 MD13G026410 MD13G027820 | 3 | |
Tree-based ortholog | many-to-many | MD13G027820 MD00G281750 MD17G014240 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD13G027870 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08494G00020 ME08542G00350 | 2 | |
Tree-based ortholog | many-to-many | ME08542G00350 ME08494G00020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08542G00350 ME08494G00020 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT6G013210 | 1 | |
Tree-based ortholog | many-to-many | MT8G089765 MT4G081180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G013210 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G27174 | 1 | |
Tree-based ortholog | many-to-1 | OS10G27174 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS10G27174 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G02180 | 1 | |
Tree-based ortholog | many-to-1 | OL02G02180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL02G02180 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00021G01730 PP00034G00650 PP00041G00390 ... | 5 | |
Tree-based ortholog | many-to-many | PP00034G00650 PP00313G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00034G00650 PP00021G01730 PP00041G00390 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G01320 PT10G24540 PT16G06310 | 3 | |
Tree-based ortholog | many-to-many | PT08G01320 PT10G24540 PT16G06310 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT10G24540 PT08G01320 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G10900 PPE_007G10970 | 2 | |
Tree-based ortholog | many-to-many | PPE_007G10900 PPE_007G10970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G10970 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27553G00120 RC29729G00190 | 2 | |
Tree-based ortholog | many-to-many | RC29729G00190 RC27553G00120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC27553G00120 RC29729G00190 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G021400 SL10G078630 | 2 | |
Tree-based ortholog | many-to-many | SL02G021400 SL10G078630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL02G021400 SL10G078630 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST10G020380 | 1 | |
Tree-based ortholog | many-to-1 | ST10G020380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G020380 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G27200 TP6G38880 | 2 | |
Tree-based ortholog | many-to-many | TP2G27200 TP6G38880 | 2 | ||
Anchor point | N/A | TP2G27200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TP2G27200 TP6G38880 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G18290 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G18290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G18290 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G08590 | 1 | |
Tree-based ortholog | many-to-1 | VV08G08590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08590 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G04790 ZM01G12740 ZM09G22870 | 3 | |
Tree-based ortholog | many-to-many | ZM01G04790 ZM09G22870 ZM01G12740 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G04790 ZM01G12740 ZM09G22870 | 3 |