Integrative Orthology Viewer: BR09G06410 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR06G33020 BR09G02330 BR09G06410 | 3 | |
Tree-based ortholog | BR09G06410 | 1 | ||
Anchor point | BR06G21410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G06410 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00005G00790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00005G00790 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G00350 AL5G06170 AL6G14060 | 3 | |
Tree-based ortholog | 1-to-1 | AL8G29910 | 1 | ||
Anchor point | 1-to-1 | AL8G29910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G29910 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G01770 AT3G27260 AT5G14270 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT5G63320 | 1 | ||
Anchor point | 1-to-1 | AT5G63320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G63320 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G16370 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G16370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G16370 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G00280 CRU_005G05110 CRU_006G12170 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_008G23410 | 1 | ||
Anchor point | 1-to-1 | CRU_008G23410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G23410 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00004G00980 CP00130G00210 | 2 | |
Tree-based ortholog | 1-to-1 | CP00004G00980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00004G00780 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR01G10520 CR03G05930 CR10G08190 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G03210 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G18250 | 1 | |
Anchor point | 1-to-1 | CL06G18250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G18250 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00020G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CS00020G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00110G00320 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00023G01240 CM00089G00740 | 2 | |
Tree-based ortholog | 1-to-1 | CM00089G00740 | 1 | ||
Anchor point | 1-to-1 | CM00089G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00023G01240 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G01110 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G01110 | 1 | ||
Anchor point | 1-to-1 | EG0002G01110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G01110 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV6G37870 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G10710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G37870 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G36910 GM05G03070 GM06G18070 | 3 | |
Tree-based ortholog | 1-to-many | GM04G36910 GM06G18070 GM05G03070 | 3 | ||
Anchor point | 1-to-1 | GM06G18070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G36910 GM06G18070 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G26880 GR03G10940 GR06G27110 ... | 4 | |
Tree-based ortholog | 1-to-1 | GR06G27110 | 1 | ||
Anchor point | 1-to-1 | GR06G27110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G27110 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G049590 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G049600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G026290 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G012820 MD14G015720 | 2 | |
Tree-based ortholog | 1-to-many | MD14G015720 MD06G012820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G015720 MD06G012820 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04953G00110 ME09876G00040 | 2 | |
Tree-based ortholog | 1-to-1 | ME06697G00210 | 1 | ||
Anchor point | 1-to-many | ME04953G00110 ME09876G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04953G00110 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT00G34890 | 1 | |
Tree-based ortholog | 1-to-1 | MT3G075040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G075040 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G38980 OS08G03360 | 2 | |
Tree-based ortholog | 1-to-1 | OS08G03360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G36194 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL06G04110 OL05G04510 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G03100 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00003G00760 PP00012G01350 PP00353G00280 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00005G00840 PP00056G00440 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT12G09430 PT15G09180 | 2 | |
Tree-based ortholog | 1-to-many | PT15G09180 PT12G09430 | 2 | ||
Anchor point | 1-to-1 | PT12G09430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G09430 PT15G09180 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_005G16190 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G16190 | 1 | ||
Anchor point | 1-to-1 | PPE_005G16190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G16190 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30147G04510 RC30190G01470 | 2 | |
Tree-based ortholog | 1-to-1 | RC30147G04510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G04510 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G093880 SL03G111090 | 2 | |
Tree-based ortholog | 1-to-1 | SL03G111090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G111090 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G037070 ST03G024050 | 2 | |
Tree-based ortholog | 1-to-1 | ST03G024050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G024050 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G26440 TP3G00290 TP6G29760 | 3 | |
Tree-based ortholog | 1-to-1 | TP2G26440 | 1 | ||
Anchor point | 1-to-1 | TP2G26440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G26440 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G12790 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G12790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G12790 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV17G07680 | 1 | |
Tree-based ortholog | 1-to-1 | VV17G07680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G01200 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G08270 ZM06G01540 | 2 | |
Tree-based ortholog | 1-to-many | ZM07G19550 ZM04G08270 ZM06G01540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G08270 ZM06G01540 | 2 |