Integrative Orthology Viewer: BR09G04730 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR06G30970 BR09G04730 | 2 | |
Tree-based ortholog | BR06G30970 BR09G04730 | 2 | ||
Anchor point | BR06G30970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR09G04730 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00126G00330 ATR_00067G01720 ATR_01954G00010 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00126G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL8G11990 | 1 | |
Tree-based ortholog | many-to-1 | AL8G11990 | 1 | ||
Anchor point | 1-to-many | AL4G17800 AL8G11990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G11990 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G48820 | 1 | |
Tree-based ortholog | many-to-1 | AT5G48820 | 1 | ||
Anchor point | 1-to-many | AT2G32710 AT5G48820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G48820 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-1 | BV7G14680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14680 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_008G08440 | 1 | |
Tree-based ortholog | many-to-1 | CRU_008G08440 | 1 | ||
Anchor point | 1-to-many | CRU_008G08440 CRU_004G13620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G08440 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00008G01520 | 1 | |
Tree-based ortholog | many-to-1 | CP00008G01520 | 1 | ||
Anchor point | 1-to-1 | CP00008G01520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00494G00040 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL09G08520 | 1 | |
Anchor point | 1-to-many | CL07G00420 CL05G03680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G08520 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00029G00570 | 1 | |
Tree-based ortholog | many-to-1 | CS00029G00570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00055G00100 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00046G00250 | 1 | |
Anchor point | 1-to-1 | CM00006G04110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01220 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G17910 | 1 | |
Tree-based ortholog | many-to-many | EG0008G16580 EG0007G10690 EG0011G17910 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G00620 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-1 | FV2G15050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07920 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G46890 GM18G36820 | 2 | |
Tree-based ortholog | many-to-many | GM08G46890 GM18G36820 | 2 | ||
Anchor point | 1-to-1 | GM08G46890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G36820 GM08G46890 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G22550 | 1 | |
Tree-based ortholog | many-to-1 | GR04G22550 | 1 | ||
Anchor point | 1-to-1 | GR04G22550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G22550 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G024050 | 1 | |
Tree-based ortholog | many-to-1 | LJ4G012370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G024050 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-1 | MD10G012320 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G015140 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME08287G00150 | 1 | |
Tree-based ortholog | many-to-1 | ME08287G00150 | 1 | ||
Anchor point | 1-to-1 | ME02421G00440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08287G00150 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT7G057920 MT7G058390 | 2 | |
Tree-based ortholog | many-to-many | MT7G057920 MT7G058390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G057920 MT7G058390 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G04490 | 1 | |
Tree-based ortholog | many-to-many | OS11G40030 OS03G04490 OS10G33310 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G33310 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT02G24210 | 1 | |
Tree-based ortholog | many-to-1 | PT02G24210 | 1 | ||
Anchor point | 1-to-1 | PT02G24210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G24210 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_008G21860 | 1 | |
Anchor point | 1-to-1 | PPE_008G21860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G21860 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30204G00340 | 1 | |
Tree-based ortholog | many-to-1 | RC30204G00340 | 1 | ||
Anchor point | 1-to-1 | RC30204G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30204G00340 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G061280 | 1 | |
Tree-based ortholog | many-to-1 | SL09G061280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G061280 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G017820 | 1 | |
Tree-based ortholog | many-to-1 | ST09G017820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G017820 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP2G19210 | 1 | |
Tree-based ortholog | many-to-1 | TP2G19210 | 1 | ||
Anchor point | 1-to-many | TP4G15050 TP2G19210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G19210 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G22140 | 1 | |
Tree-based ortholog | many-to-many | TC0002G09450 TC0001G05140 TC0001G22140 ... | 4 | ||
Anchor point | 1-to-1 | TC0001G22140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G22140 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-1 | VV07G12880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G12880 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM04G02170 ZM09G01490 ZM01G02910 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G28210 ZM01G02910 | 2 |