Integrative Orthology Viewer: BR08G30890 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR08G30890 BR09G53000 | 2 | |
Tree-based ortholog | BR09G53000 BR08G30890 | 2 | ||
Anchor point | BR09G53000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR08G30890 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00066G01060 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00066G01060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G01060 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G05180 | 1 | |
Tree-based ortholog | many-to-1 | AL1G05180 | 1 | ||
Anchor point | 1-to-1 | AL1G05180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G05180 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G05620 | 1 | |
Tree-based ortholog | many-to-1 | AT1G05620 | 1 | ||
Anchor point | 1-to-1 | AT1G05620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G05620 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G02250 | 1 | |
Tree-based ortholog | many-to-1 | BV6G02250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G02250 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G04650 | 1 | |
Tree-based ortholog | many-to-1 | CRU_001G04650 | 1 | ||
Anchor point | 1-to-1 | CRU_001G04650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G04650 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00151G00090 | 1 | |
Tree-based ortholog | many-to-1 | CP00151G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00151G00090 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G05020 | 1 | |
Tree-based ortholog | many-to-many | CR04G03790 CR04G00370 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G05020 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL00G07490 | 1 | |
Tree-based ortholog | many-to-1 | CL00G07490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G07490 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00056G00680 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00056G00680 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00043G01320 | 1 | |
Tree-based ortholog | many-to-1 | CM00043G01320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00043G01320 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0001G03290 | 1 | |
Tree-based ortholog | many-to-many | EG0001G03310 EG0001G03330 EG0001G03290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G03290 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G02430 | 1 | |
Tree-based ortholog | many-to-1 | FV1G02430 | 1 | ||
Anchor point | 1-to-1 | FV1G02430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G02430 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM00G01440 GM20G00200 | 2 | |
Tree-based ortholog | many-to-many | GM00G01440 GM20G00200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G00200 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR12G12010 | 1 | |
Tree-based ortholog | many-to-1 | GR12G12010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G12010 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD02G000970 | 1 | |
Tree-based ortholog | many-to-many | MD00G041030 MD15G007890 MD02G000970 ... | 4 | ||
Anchor point | 1-to-1 | MD15G007890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G000970 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME04024G00150 | 1 | |
Tree-based ortholog | many-to-1 | ME04024G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04024G00150 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G039400 MT1G039410 | 2 | |
Tree-based ortholog | many-to-many | MT1G039400 MT1G039410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G039410 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G31170 | 1 | |
Tree-based ortholog | many-to-1 | OS03G31170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G31170 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL01G02020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G02110 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00357G00090 | 1 | |
Tree-based ortholog | many-to-1 | PP00357G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00357G00090 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT07G14460 | 1 | |
Tree-based ortholog | many-to-1 | PT07G14460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G14460 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_007G28630 | 1 | |
Tree-based ortholog | many-to-1 | PPE_007G28630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G28630 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30042G00300 | 1 | |
Tree-based ortholog | many-to-1 | RC30042G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30042G00300 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G018990 | 1 | |
Tree-based ortholog | many-to-many | SL12G018990 SL12G096630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G018990 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST12G014580 ST12G028960 | 2 | |
Tree-based ortholog | many-to-many | ST12G014580 ST12G028960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G014580 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G04470 | 1 | |
Tree-based ortholog | many-to-1 | TP1G04470 | 1 | ||
Anchor point | 1-to-1 | TP1G04470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G04470 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G00180 | 1 | |
Tree-based ortholog | many-to-1 | TC0005G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G00180 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G14070 | 1 | |
Tree-based ortholog | many-to-1 | VV05G14070 | 1 | ||
Anchor point | 1-to-1 | VV05G14070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G14070 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G07990 ZM08G01550 | 2 | |
Tree-based ortholog | many-to-many | ZM03G07990 ZM08G01550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G07990 ZM08G01550 | 2 |