Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
BR08G27450
(Brassica rapa)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Brassica rapa | Orthologous gene family | BR06G10100 BR08G27450 | 2 |  |
| Anchor point | BR06G09890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | BR08G27450 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00036G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00036G00540 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G15370 | 1 | |
| Anchor point | 1-to-1 | AL1G15370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G15370 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G14560 | 1 | |
| Anchor point | 1-to-1 | AT1G14560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G14560 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G03270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G03270 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G13680 | 1 | |
| Anchor point | 1-to-1 | CRU_001G13680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G13680 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00007G01580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00007G01580 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G13850 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G16690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G16690 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00005G02270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00005G02270 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00014G00940 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G00940 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0003G05390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0003G05390 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV2G33000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G33000 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM04G05530 GM06G05550 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G05550 GM04G05530 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR09G04380 GR10G09900 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G04380 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G024600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G024600 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G450180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G450180 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00206G00250 ME07859G00660 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07859G00660 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT3G104600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G104600 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G38990 OS01G51250 | 2 | |
| Anchor point | 1-to-1 | OS05G46220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G38990 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL03G04280 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00357G00150 | 1 | |
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT06G22630 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G22630 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G41550 | 1 | |
| Anchor point | 1-to-1 | PPE_001G32500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G41550 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29739G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29739G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL08G062860 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G062860 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST08G012790 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G012790 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G12910 | 1 | |
| Anchor point | 1-to-1 | TP1G12910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G12910 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G05350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G05350 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV04G08160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G08160 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM08G22800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G22800 | 1 |