Integrative Orthology Viewer: BR08G22980 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR08G22980 BR09G29600 | 2 | |
Tree-based ortholog | BR09G29600 BR08G22980 | 2 | ||
Anchor point | BR09G29600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR08G22980 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00007G02380 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00007G02380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G02380 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G27630 | 1 | |
Tree-based ortholog | many-to-1 | AL1G27630 | 1 | ||
Anchor point | 1-to-1 | AL1G27630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G27630 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G25540 | 1 | |
Tree-based ortholog | many-to-1 | AT1G25540 | 1 | ||
Anchor point | 1-to-1 | AT1G25540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G25540 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G07170 | 1 | |
Tree-based ortholog | many-to-1 | BV3G07170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G07170 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G23940 | 1 | |
Tree-based ortholog | many-to-1 | CRU_001G23940 | 1 | ||
Anchor point | 1-to-1 | CRU_001G23940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G23940 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G02080 | 1 | |
Tree-based ortholog | many-to-1 | CP00001G02080 | 1 | ||
Anchor point | 1-to-1 | CP00001G02080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G02080 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL05G24030 | 1 | |
Anchor point | 1-to-1 | CL05G24030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G24030 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00019G00640 | 1 | |
Tree-based ortholog | many-to-1 | CS00019G00640 | 1 | ||
Anchor point | 1-to-1 | CS00019G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G00640 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00016G05560 | 1 | |
Tree-based ortholog | many-to-1 | CM00016G05560 | 1 | ||
Anchor point | 1-to-1 | CM00016G05560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05560 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G08480 | 1 | |
Tree-based ortholog | many-to-1 | EG0004G08480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G08480 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G02280 | 1 | |
Tree-based ortholog | many-to-many | FV5G02220 FV0G02280 FV0G26790 | 3 | ||
Anchor point | 1-to-many | FV0G02280 FV5G10680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G02280 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G21707 GM02G10880 | 2 | |
Tree-based ortholog | many-to-many | GM01G21680 GM02G15745 GM17G19084 ... | 8 | ||
Anchor point | 1-to-many | GM01G21680 GM02G10880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G21707 GM02G10880 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G13820 GR13G08030 | 2 | |
Tree-based ortholog | many-to-many | GR13G08030 GR05G13820 | 2 | ||
Anchor point | 1-to-1 | GR13G08030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G13820 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G018750 | 1 | |
Tree-based ortholog | many-to-1 | LJ2G018750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G018750 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD16G001910 MD16G001940 | 2 | |
Tree-based ortholog | many-to-many | MD16G001910 MD00G440340 MD16G001940 | 3 | ||
Anchor point | 1-to-1 | MD16G001910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G440340 MD16G001940 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME08359G00420 | 1 | |
Tree-based ortholog | many-to-1 | ME08359G00420 | 1 | ||
Anchor point | 1-to-1 | ME08359G00420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G00420 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT5G054680 | 1 | |
Tree-based ortholog | many-to-many | MT5G054690 MT7G077950 MT6G085100 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G054680 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS09G13610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G13610 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00233G00080 | 1 | |
Tree-based ortholog | many-to-many | PP00233G00200 PP00233G00080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00233G00080 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G11770 PT10G12860 | 2 | |
Tree-based ortholog | many-to-many | PT10G12860 PT08G11770 | 2 | ||
Anchor point | 1-to-many | PT10G12860 PT12G06050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G11770 PT10G12860 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28883G00380 | 1 | |
Tree-based ortholog | many-to-1 | RC28883G00380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28883G00380 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL12G070100 | 1 | |
Tree-based ortholog | many-to-many | SL05G009710 SL12G070100 | 2 | ||
Anchor point | 1-to-1 | SL05G009710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G070100 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST12G015780 | 1 | |
Tree-based ortholog | many-to-many | ST05G007590 ST12G015780 | 2 | ||
Anchor point | 1-to-1 | ST05G007590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G015780 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G22670 | 1 | |
Tree-based ortholog | many-to-1 | TP1G22670 | 1 | ||
Anchor point | 1-to-1 | TP1G22670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G22670 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-1 | TC0002G35750 | 1 | |
Anchor point | 1-to-1 | TC0002G35750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35750 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G08110 | 1 | |
Tree-based ortholog | many-to-1 | VV01G08110 | 1 | ||
Anchor point | 1-to-1 | VV01G08110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G08110 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM02G29210 | 1 | |
Tree-based ortholog | many-to-1 | ZM02G29210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G29210 | 1 |