Integrative Orthology Viewer: BR08G22930 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR08G22930 | 1 | |
Tree-based ortholog | BR08G22930 BR07G07980 | 2 | ||
Anchor point | BR09G29560 BR07G07980 BR09G20880 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | BR08G22930 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00019G03240 ATR_00048G00400 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00048G00400 | 1 | ||
Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL1G27680 | 1 | |
Anchor point | many-to-1 | AL1G27680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G27680 | 1 | ||
Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT1G25490 | 1 | |
Anchor point | many-to-1 | AT1G25490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G25490 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV6G00540 BV5G05260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00540 | 1 | ||
Capsella rubella | Tree-based ortholog | many-to-1 | CRU_001G23990 | 1 | |
Anchor point | many-to-1 | CRU_001G23990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G23990 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00001G01920 CP00013G00070 | 2 | |
Anchor point | many-to-1 | CP00001G01920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G01920 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR11G03920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G03920 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL05G23960 | 1 | |
Anchor point | many-to-1 | CL05G23960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23960 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00019G00530 CS00663G00060 | 2 | |
Anchor point | many-to-1 | CS00019G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00663G00060 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00016G05640 | 1 | |
Anchor point | many-to-1 | CM00016G05640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G05640 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0002G24800 EG0011G18320 | 2 | |
Anchor point | many-to-1 | EG0002G24800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G24800 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV5G36360 FV0G01970 | 2 | |
Anchor point | many-to-many | FV0G01970 FV5G10430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G01970 | 1 | ||
Glycine max | Tree-based ortholog | many-to-many | GM20G24790 GM10G42250 GM02G10790 ... | 5 | |
Anchor point | many-to-many | GM07G10000 GM02G10790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G24790 GM10G42250 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-many | GR13G08130 GR08G18450 GR04G11250 ... | 5 | |
Anchor point | many-to-many | GR08G18450 GR13G08130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G28610 GR07G00610 | 2 | ||
Lotus japonicus | Tree-based ortholog | many-to-many | LJ2G011230 LJ5G026010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G011230 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G422000 MD00G306290 MD00G433430 ... | 4 | |
Anchor point | many-to-1 | MD16G001880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G001880 MD00G306290 | 2 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME06005G00240 ME08359G00320 ME05898G00020 ... | 4 | |
Anchor point | many-to-1 | ME08359G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G00320 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT1G111270 MT6G084690 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G111270 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS09G07510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G07510 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL07G02200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02200 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00117G00540 PP00214G00150 PP00197G00680 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00117G00540 PP00214G00150 PP00197G00680 | 3 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT08G11850 PT10G12750 PT12G06270 | 3 | |
Anchor point | many-to-many | PT10G12750 PT08G11850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G12750 | 1 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_005G22240 PPE_001G31760 | 2 | |
Anchor point | many-to-1 | PPE_001G31760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G31760 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC28883G00240 RC30174G03810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28883G00240 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL04G007100 SL05G009600 SL06G069180 | 3 | |
Anchor point | many-to-many | SL06G069180 SL05G009600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G009600 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST04G005850 ST05G007720 ST06G026100 | 3 | |
Anchor point | many-to-1 | ST05G007720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G007720 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-1 | TP1G22720 | 1 | |
Anchor point | many-to-many | TP1G22720 TP2G15040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G22720 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-many | TC0002G35610 TC0003G03190 | 2 | |
Anchor point | many-to-1 | TC0002G35610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G35610 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV01G08000 VV17G05840 | 2 | |
Anchor point | many-to-1 | VV01G08000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G05840 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM09G05770 ZM06G07640 ZM09G13740 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G07640 | 1 |