Integrative Orthology Viewer: BR08G06950 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR03G37450 BR05G20570 BR08G06950 | 3 | |
Tree-based ortholog | BR08G06950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR08G06950 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00002G05070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G05070 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G25490 AL7G29750 | 2 | |
Tree-based ortholog | 1-to-1 | AL7G29750 | 1 | ||
Anchor point | N/A | AL3G25460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G29750 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G23050 AT4G14550 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G14550 | 1 | ||
Anchor point | N/A | AT4G14550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G14550 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G13020 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G13020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G13020 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G22260 CRU_007G26490 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G26490 | 1 | ||
Anchor point | N/A | CRU_007G26480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G26490 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00058G00290 | 1 | |
Tree-based ortholog | 1-to-1 | CP00058G00290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00058G00290 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G05140 CL06G06390 | 2 | |
Tree-based ortholog | 1-to-many | CL05G05140 CL06G06390 | 2 | ||
Anchor point | N/A | CL05G05140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G06390 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00132G00110 | 1 | |
Tree-based ortholog | 1-to-1 | CS00132G00110 | 1 | ||
Anchor point | N/A | CS00132G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00132G00110 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G05790 CM00105G00020 | 2 | |
Tree-based ortholog | 1-to-many | CM00069G00400 CM00006G05790 CM00105G00020 | 3 | ||
Anchor point | N/A | CM00022G00710 CM00006G05790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00105G00020 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G25690 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G25690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G25690 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G23810 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G23810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G23810 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G32340 GM20G35270 | 2 | |
Tree-based ortholog | 1-to-many | GM10G32340 GM20G35270 | 2 | ||
Anchor point | N/A | GM10G00291 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G35270 GM10G32340 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G04650 GR06G24600 | 2 | |
Tree-based ortholog | 1-to-1 | GR06G24600 | 1 | ||
Anchor point | N/A | GR06G24590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G24600 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G022540 | 1 | |
Tree-based ortholog | 1-to-1 | LJ5G022540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G022540 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G218550 MD13G020550 | 2 | |
Tree-based ortholog | 1-to-many | MD00G218550 MD13G020550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G020550 MD00G218550 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01430 ME10563G00660 | 2 | |
Tree-based ortholog | 1-to-many | ME01551G01430 ME10563G00660 | 2 | ||
Anchor point | N/A | ME01551G01430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01551G01430 ME10563G00660 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G093240 | 1 | |
Tree-based ortholog | 1-to-1 | MT1G093240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G093240 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G43400 OS12G40890 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G40890 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00184G00110 | 1 | |
Tree-based ortholog | 1-to-many | PP00073G00060 PP00184G00110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00073G00060 PP00184G00110 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G16120 PT10G07830 | 2 | |
Tree-based ortholog | 1-to-many | PT08G16120 PT10G07830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G07830 PT08G16120 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G02700 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G02700 | 1 | ||
Anchor point | N/A | PPE_001G02680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G02700 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29844G00200 | 1 | |
Tree-based ortholog | 1-to-1 | RC29844G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29598G00190 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G083290 | 1 | |
Tree-based ortholog | 1-to-many | SL06G053830 SL09G083290 | 2 | ||
Anchor point | N/A | SL06G053830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G083290 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G025170 | 1 | |
Tree-based ortholog | 1-to-many | ST06G016980 ST09G025170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G016980 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G20720 | 1 | |
Tree-based ortholog | 1-to-1 | TP7G12640 | 1 | ||
Anchor point | N/A | TP3G20710 TP7G12640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G20720 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G24750 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G24750 | 1 | ||
Anchor point | N/A | TC0004G24720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G24750 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G05920 VV11G04830 | 2 | |
Tree-based ortholog | 1-to-1 | VV14G15240 | 1 | ||
Anchor point | N/A | VV05G05910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G05920 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM01G28860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G16030 | 1 |