Integrative Orthology Viewer: BR07G27780 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G20990 BR07G27780 BR09G31520 | 3 | |
Tree-based ortholog | BR02G20990 BR07G27780 | 2 | ||
Anchor point | BR02G20990 BR09G31520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | BR07G27780 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00021G00350 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00021G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G00350 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G24480 AL2G20220 | 2 | |
Tree-based ortholog | many-to-1 | AL2G20220 | 1 | ||
Anchor point | many-to-many | AL1G24480 AL2G20220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G20220 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G22870 AT1G71410 | 2 | |
Tree-based ortholog | many-to-1 | AT1G71410 | 1 | ||
Anchor point | many-to-many | AT1G22870 AT1G71410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G71410 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G11450 | 1 | |
Tree-based ortholog | many-to-1 | BV1G11450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G11450 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G21460 CRU_002G17210 | 2 | |
Tree-based ortholog | many-to-1 | CRU_002G17210 | 1 | ||
Anchor point | many-to-many | CRU_002G17210 CRU_001G21460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G17210 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00021G00950 | 1 | |
Anchor point | many-to-1 | CP00021G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G00950 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G12870 | 1 | |
Tree-based ortholog | many-to-1 | CR03G12870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12870 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL08G00390 | 1 | |
Anchor point | many-to-1 | CL08G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G00370 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00380G00070 | 1 | |
Tree-based ortholog | many-to-many | CS06646G00010 CS00380G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00380G00070 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00051G02110 | 1 | |
Tree-based ortholog | many-to-1 | CM00051G02110 | 1 | ||
Anchor point | many-to-1 | CM00051G02110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G02110 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G34870 | 1 | |
Tree-based ortholog | many-to-1 | EG0006G34870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G34870 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G15860 | 1 | |
Tree-based ortholog | many-to-1 | FV2G15860 | 1 | ||
Anchor point | many-to-1 | FV2G15860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G15860 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G00470 GM12G37070 | 2 | |
Tree-based ortholog | many-to-many | GM09G00470 GM12G37070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G37070 GM09G00470 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G26770 GR09G26290 GR09G29050 | 3 | |
Tree-based ortholog | many-to-many | GR09G26290 GR04G26770 GR09G29050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G29050 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G006010 | 1 | |
Tree-based ortholog | many-to-1 | LJ3G006010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G006010 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G282310 | 1 | |
Tree-based ortholog | many-to-many | MD00G282300 MD00G517510 MD03G012260 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G282310 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06650G00030 | 1 | |
Tree-based ortholog | many-to-many | ME11897G00110 ME06650G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06650G00030 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G030910 | 1 | |
Tree-based ortholog | many-to-1 | MT4G030910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G030910 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS01G42950 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G42950 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00213G00570 PP00099G00340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00213G00570 PP00099G00340 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT13G09870 | 1 | |
Tree-based ortholog | many-to-1 | PT13G09870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G09870 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G00600 | 1 | |
Tree-based ortholog | many-to-1 | PPE_008G00600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G00600 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-1 | RC29757G00010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29757G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G042990 | 1 | |
Tree-based ortholog | many-to-1 | SL11G042990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G042990 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST11G018990 | 1 | |
Tree-based ortholog | many-to-1 | ST11G018990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G018990 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G20350 TP5G26570 | 2 | |
Tree-based ortholog | many-to-1 | TP5G26570 | 1 | ||
Anchor point | many-to-many | TP5G26570 TP1G20350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G26570 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G17960 | 1 | |
Tree-based ortholog | many-to-1 | TC0008G17960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G17960 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G17940 | 1 | |
Tree-based ortholog | many-to-1 | VV18G17940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G17940 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G39890 | 1 | |
Tree-based ortholog | many-to-many | ZM03G39890 ZM08G23760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G39890 | 1 |