Integrative Orthology Viewer: BR07G07280 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR07G07280 BR08G22270 | 2 | |
Tree-based ortholog | BR07G07280 BR08G22270 | 2 | ||
Anchor point | BR08G22270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR07G07280 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00033G00150 ATR_00109G01220 | 2 | |
Tree-based ortholog | many-to-many | ATR_00109G01220 ATR_00080G00820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00033G00150 ATR_00109G01220 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G28710 | 1 | |
Tree-based ortholog | many-to-1 | AL1G28710 | 1 | ||
Anchor point | 1-to-1 | AL1G28710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G28710 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G27600 | 1 | |
Tree-based ortholog | many-to-1 | AT1G27600 | 1 | ||
Anchor point | 1-to-1 | AT1G27600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G27600 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G26060 | 1 | |
Tree-based ortholog | many-to-1 | BV0G26060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G26060 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G25070 | 1 | |
Tree-based ortholog | many-to-1 | CRU_001G25070 | 1 | ||
Anchor point | 1-to-1 | CRU_001G25070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G25070 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00366G00020 | 1 | |
Tree-based ortholog | many-to-1 | CP00366G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00366G00020 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G09040 | 1 | |
Tree-based ortholog | many-to-1 | CL11G09040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G09040 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00004G03550 | 1 | |
Tree-based ortholog | many-to-1 | CS00004G03550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G03550 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM01596G02030 | 1 | |
Tree-based ortholog | many-to-1 | CM01596G02030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G02030 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G04040 | 1 | |
Tree-based ortholog | many-to-many | EG0006G04040 EG0006G17730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G04040 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G24060 | 1 | |
Tree-based ortholog | many-to-1 | FV5G24060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G24060 | 1 | ||
Glycine max | Orthologous gene family | many-to-1 | GM06G09560 | 1 | |
Tree-based ortholog | many-to-1 | GM06G09560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G09560 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G13760 GR05G09730 GR10G03100 | 3 | |
Tree-based ortholog | many-to-many | GR05G09730 GR10G03100 GR02G13760 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G03100 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G029340 | 1 | |
Tree-based ortholog | many-to-1 | LJ1G029340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G029340 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G256840 MD00G256850 MD15G031290 | 3 | |
Tree-based ortholog | many-to-many | MD15G031290 MD00G256840 MD00G256850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G256840 MD00G256850 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03299G00410 ME04260G00090 | 2 | |
Tree-based ortholog | many-to-many | ME04260G00090 ME03299G00410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04260G00090 ME03299G00410 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G111060 | 1 | |
Tree-based ortholog | many-to-1 | MT3G111060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G111060 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G13810 | 1 | |
Tree-based ortholog | many-to-many | OS04G01280 OS10G13810 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G13810 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G02530 PP00052G00510 | 2 | |
Tree-based ortholog | many-to-many | PP00001G02530 PP00052G00510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00001G02530 PP00052G00510 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT02G10730 | 1 | |
Tree-based ortholog | many-to-1 | PT02G10730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G10730 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G57410 | 1 | |
Tree-based ortholog | many-to-1 | PPE_001G57410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G57410 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30170G00090 | 1 | |
Tree-based ortholog | many-to-1 | RC30170G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G00090 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G076920 | 1 | |
Tree-based ortholog | many-to-1 | SL04G076920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G076920 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G028680 | 1 | |
Tree-based ortholog | many-to-1 | ST04G028680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G028680 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G23830 | 1 | |
Tree-based ortholog | many-to-1 | TP1G23830 | 1 | ||
Anchor point | 1-to-1 | TP1G23830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G23830 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G07550 | 1 | |
Tree-based ortholog | many-to-1 | TC0008G07550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G07550 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV18G05140 | 1 | |
Tree-based ortholog | many-to-1 | VV18G05140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G05140 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G34980 ZM06G30920 ZM08G00610 ... | 4 | |
Tree-based ortholog | many-to-many | ZM10G13220 ZM08G00610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G34980 | 1 |